RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 SYN2Q92777 582 aaPredicted RBP5.25□□□□□ -1.57
LMNB1-208ENST00000504788 KHSRPQ92945 711 aaKnown RBP eCLIP5.25□□□□□ -1.57
LMNB1-208ENST00000504788 MYLPFQ96A32 169 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 FUBP3Q96I24 572 aaKnown RBP eCLIP5.25□□□□□ -1.575e-8■■□□□ 12.7
LMNB1-208ENST00000504788 KCNK16Q96T55 309 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 PCDHB18PQ96TA0 734 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 ZNF518BQ9C0D4 1074 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 NSUN3Q9H649 340 aaKnown RBP5.25□□□□□ -1.57
LMNB1-208ENST00000504788 IL21Q9HBE4 155 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 ENTPD7Q9NQZ7 604 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 ARHGAP20Q9P2F6 1191 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 PUF60Q9UHX1 559 aaKnown RBP5.25□□□□□ -1.57
LMNB1-208ENST00000504788 CDH22Q9UJ99 828 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 PCDHGC3Q9UN70 934 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.25□□□□□ -1.57
LMNB1-208ENST00000504788 COL4A2P08572 1712 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 NCANO14594 1321 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 USP34Q70CQ2 3546 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 TCRBV5S1A1TA0A578 114 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 H7C4K7 107 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 RIOK3O14730 519 aaKnown RBP5.25□□□□□ -1.57
LMNB1-208ENST00000504788 MFAP3LO75121 409 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 MOSPD3O75425 235 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 SOAT2O75908 522 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 ADCY5O95622 1261 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 ADH1AP07327 375 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 PLEKP08567 350 aaPredicted RBP5.25□□□□□ -1.57
LMNB1-208ENST00000504788 SPATA31D3P0C874 917 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 CHRM1P11229 460 aaPredicted RBP5.25□□□□□ -1.57
LMNB1-208ENST00000504788 VDRP11473 427 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 UNGP13051 313 aaPredicted RBP5.25□□□□□ -1.57
LMNB1-208ENST00000504788 P4HA1P13674 534 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 BRD2P25440 801 aaKnown RBP5.25□□□□□ -1.57
LMNB1-208ENST00000504788 PCSK1P29120 753 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 NRIP1P48552 1158 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 GPR15P49685 360 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 MFAP3P55082 362 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 USP46P62068 366 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 ZBED6P86452 979 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 FMO1Q01740 532 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 ADCY1Q08828 1119 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 GOLGA8FQ08AF8 430 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 GOLGA8DPQ0D2H9 430 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 SMARCB1Q12824 385 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 PTP4A2Q12974 167 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 DUSP4Q13115 394 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 FILIP1LQ4L180 1135 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 SLC39A12Q504Y0 691 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 MDH1BQ5I0G3 518 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 SPATA31D4Q6ZUB0 917 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 ZNF571Q7Z3V5 609 aaPredicted RBP5.25□□□□□ -1.57
LMNB1-208ENST00000504788 RBM23Q86U06 439 aaKnown RBP5.25□□□□□ -1.57
LMNB1-208ENST00000504788 FAM35AQ86V20 835 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 GLYCTKQ8IVS8 523 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 STKLD1Q8NE28 680 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 CMASQ8NFW8 434 aaPredicted RBP5.25□□□□□ -1.57
LMNB1-208ENST00000504788 SPPL2BQ8TCT7 592 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 SLC2A14Q8TDB8 520 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 C2orf15Q8WU43 125 aaKnown RBP5.25□□□□□ -1.57
LMNB1-208ENST00000504788 HDAC7Q8WUI4 952 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 PABPC5Q96DU9 382 aaKnown RBP5.25□□□□□ -1.57
LMNB1-208ENST00000504788 CYFIP2Q96F07 1278 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 FAM81BQ96LP2 452 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 MYRFLQ96LU7 910 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 PGLYRP2Q96PD5 576 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 FAM49BQ9NUQ9 324 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 TJP2Q9UDY2 1190 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 TSPAN16Q9UKR8 245 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 MAFFQ9ULX9 164 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 SSX2IPQ9Y2D8 614 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 INSL5Q9Y5Q6 135 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 USP3Q9Y6I4 520 aa5.25□□□□□ -1.57
LMNB1-208ENST00000504788 COL4A3Q01955 1670 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 F8VP50 259 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 ZNF263O14978 683 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 ZMYND10O75800 440 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 CSPG5O95196 566 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 FYNP06241 537 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 MMEP08473 750 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 ZDHHC11BP0C7U3 371 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 TRIM21P19474 475 aaKnown RBP5.24□□□□□ -1.57
LMNB1-208ENST00000504788 BDNFP23560 247 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 HOXA9P31269 272 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 CCR2P41597 374 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 PLA2G4AP47712 749 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 TPM4P67936 248 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 NOMO3P69849 1222 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 CDK17Q00537 523 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 CREMQ03060 361 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 PTK2Q05397 1052 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 PDE4CQ08493 712 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 NFE2Q16621 373 aaPredicted RBP5.24□□□□□ -1.57
LMNB1-208ENST00000504788 KIAA1841Q6NSI8 718 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 PMF1Q6P1K2 205 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 VSTM1Q6UX27 236 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 RTL10Q7L3V2 364 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 THEM5Q8N1Q8 247 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 ANKRD52Q8NB46 1076 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 SMRP1Q8NCR6 262 aa5.24□□□□□ -1.57
LMNB1-208ENST00000504788 KREMEN2Q8NCW0 462 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms