RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 KCNV1Q6PIU1 500 aa6.63□□□□□ -1.35
TRAPPC13-206ENST00000504751 KRT28Q7Z3Y7 464 aa6.63□□□□□ -1.35
TRAPPC13-206ENST00000504751 TXLNBQ8N3L3 684 aa6.63□□□□□ -1.35
TRAPPC13-206ENST00000504751 LNX2Q8N448 690 aa6.63□□□□□ -1.35
TRAPPC13-206ENST00000504751 ENAHQ8N8S7 591 aaPredicted RBP6.63□□□□□ -1.35
TRAPPC13-206ENST00000504751 PROKR1Q8TCW9 393 aa6.63□□□□□ -1.35
TRAPPC13-206ENST00000504751 ZNF384Q8TF68 577 aa6.63□□□□□ -1.35
TRAPPC13-206ENST00000504751 POF1BQ8WVV4 589 aa6.63□□□□□ -1.35
TRAPPC13-206ENST00000504751 FAM136AQ96C01 138 aa6.63□□□□□ -1.35
TRAPPC13-206ENST00000504751 NELL2Q99435 816 aa6.63□□□□□ -1.35
TRAPPC13-206ENST00000504751 TTLL2Q9BWV7 592 aa6.63□□□□□ -1.35
TRAPPC13-206ENST00000504751 STK33Q9BYT3 514 aa6.63□□□□□ -1.35
TRAPPC13-206ENST00000504751 PTPRHQ9HD43 1115 aa6.63□□□□□ -1.35
TRAPPC13-206ENST00000504751 HEYLQ9NQ87 328 aaPredicted RBP6.63□□□□□ -1.35
TRAPPC13-206ENST00000504751 SERTAD3Q9UJW9 196 aa6.63□□□□□ -1.35
TRAPPC13-206ENST00000504751 MAN2B2Q9Y2E5 1009 aa6.63□□□□□ -1.35
TRAPPC13-206ENST00000504751 A0A087WV62 115 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 B8ZZF3 427 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 IFRD1O00458 451 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 ADAMTS3O15072 1205 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 PROM1O43490 865 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 PLA2G6O60733 806 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 TPH1P17752 444 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 GABRB3P28472 473 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 TRAPPC10P48553 1259 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 HNRNPMP52272 730 aaKnown RBP eCLIP6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 CHAF1AQ13111 956 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 ZNF750Q32MQ0 723 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 PTCHD3Q3KNS1 767 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 LSM12Q3MHD2 195 aaKnown RBP6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 CACHD1Q5VU97 1274 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 IGFL4Q6B9Z1 124 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 ERAP2Q6P179 960 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 SLC15A3Q8IY34 581 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 CYP2W1Q8TAV3 490 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 MYCBPAPQ8TBZ2 947 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 MORC4Q8TE76 937 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 ZNF566Q969W8 418 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 C18orf8Q96DM3 657 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 PTCD3Q96EY7 689 aaKnown RBP6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 TMEM41AQ96HV5 264 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 PSMD1Q99460 953 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 GPR20Q99678 358 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 EIF2AQ9BY44 585 aaKnown RBP6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 ACTRT3Q9BYD9 372 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 MAGEB5Q9BZ81 275 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 TPSD1Q9BZJ3 242 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 AMBRA1Q9C0C7 1298 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 FAM83DQ9H4H8 585 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 SERHL2Q9H4I8 314 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 TBCCD1Q9NVR7 557 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 LRCH1Q9Y2L9 728 aa6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 REXO2Q9Y3B8 237 aaKnown RBP6.62□□□□□ -1.35
TRAPPC13-206ENST00000504751 PIPSLA2A3N6 862 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 FAM234BA2RU67 622 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 AQP7P3A6NL99 342 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 F5H423 210 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 KCNQ3O43525 872 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 SRGAP2O75044 1071 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 PIAS2O75928 621 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 RASAL1O95294 804 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 NDST3O95803 873 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 ITGAMP11215 1152 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 COPAP53621 1224 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 ITGA8P53708 1063 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 PRKAG1P54619 331 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 TNFAIP2Q03169 654 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 E2F2Q14209 437 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 KCNAB1Q14722 419 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 SF3B3Q15393 1217 aaKnown RBP6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 VWA1Q6PCB0 445 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 DNAJB14Q8TBM8 379 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 PPP2R3CQ969Q6 453 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 ZNF747Q9BV97 191 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 KRTAP9-9Q9BYP9 154 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 KRTAP9-4Q9BYQ2 154 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 TRIM5Q9C035 493 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 RIPOR2Q9Y4F9 1068 aa6.61□□□□□ -1.35
TRAPPC13-206ENST00000504751 NCANO14594 1321 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 NARSO43776 548 aaKnown RBP6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 RHOP08100 348 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 PDHA1P08559 390 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 TECP42680 631 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 PDE6CP51160 858 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 SP2Q02086 613 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 ITIH3Q06033 890 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 STARD3Q14849 445 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 GRAMD1BQ3KR37 738 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 TUBB8Q3ZCM7 444 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 LY6G5CQ5SRR4 150 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 ABHD17BQ5VST6 288 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 SYTL1Q8IYJ3 562 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 GLIS1Q8NBF1 620 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 B3GALNT2Q8NCR0 500 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 ATG4AQ8WYN0 398 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 WDR11Q9BZH6 1224 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 MMRN2Q9H8L6 949 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 GBA2Q9HCG7 927 aaPredicted RBP6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 KCTD5Q9NXV2 234 aa6.6□□□□□ -1.35
TRAPPC13-206ENST00000504751 CEP83Q9Y592 693 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms