RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 MBTPS2O43462 519 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 XYLBO75191 536 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 NOL4O94818 638 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 LRG1P02750 347 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 PAEPP09466 180 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 CYP2F1P24903 491 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 ZNF132P52740 706 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 RPL10AP62906 217 aaKnown RBP12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 CYP27A1Q02318 531 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 APBA1Q02410 837 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 ORC1Q13415 861 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 NR1I3Q14994 352 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 SYCP1Q15431 976 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 AAK1Q2M2I8 961 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 MGAT5BQ3V5L5 792 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 ZNF394Q53GI3 561 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 IQCEQ6IPM2 695 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 TMEM270Q6UE05 265 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 VSTM1Q6UX27 236 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 PAQR9Q6ZVX9 377 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 FUKQ8N0W3 1084 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 ZNF687Q8N1G0 1237 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 C12orf29Q8N999 325 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 RNF214Q8ND24 703 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 SHC3Q92529 594 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 SUSD6Q92537 303 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 SMG7Q92540 1137 aaKnown RBP12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 CEP295NLQ96MC4 621 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 HNRNPABQ99729 332 aaKnown RBP12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 NAA15Q9BXJ9 866 aaKnown RBP12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 KIAA1257Q9ULG3 409 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 ASB3Q9Y575 518 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 NCOR1O75376 2440 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 XIRP2A4UGR9 3374 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 A0A1W2PQC6 194 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 GRXCR2A6NFK2 248 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 RNF225M0QZC1 329 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 CCL16O15467 120 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 UCHL3P15374 230 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 BDNFP23560 247 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 MTHFRP42898 656 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 KLK7P49862 253 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 CDR1P51861 262 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 EPHB3P54753 998 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 UBASH3AP57075 661 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 TFF2Q03403 129 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 TWF1Q12792 350 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 CLUL1Q15846 466 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 ARHGAP44Q17R89 818 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 ATAT1Q5SQI0 421 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 ARHGAP17Q68EM7 881 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 ATXN2LQ8WWM7 1075 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 CYFIP2Q96F07 1278 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 HEXIM2Q96MH2 286 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 RIPOR3Q96MK2 946 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 NECTIN4Q96NY8 510 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 SEPT5Q99719 369 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 APOL5Q9BWW9 433 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 GANQ9H2C0 597 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 PIDD1Q9HB75 910 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 CEP72Q9P209 647 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 AJAP1Q9UKB5 411 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 FAM50BQ9Y247 325 aa12.64□□□□□ -0.39
PDLIM5-208ENST00000504489 FOXN3O00409 490 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 CLDN5O00501 218 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 TRIM66O15016 1216 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 SOAT2O75908 522 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 VDRP11473 427 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 KRT5P13647 590 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 CCDC130P13994 396 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 PTPN2P17706 415 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 ATF6P18850 670 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 MRPS5P82675 430 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 DRAP1Q14919 205 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 SGO2Q562F6 1265 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 PPP1R26Q5T8A7 1209 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 ITIH5Q86UX2 942 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 FAM35AQ86V20 835 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 GAS2L3Q86XJ1 694 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 ELMOD1Q8N336 334 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 RBBP8NLQ8NC74 664 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 NEK11Q8NG66 645 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 FEZF2Q8TBJ5 459 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 SLC2A14Q8TDB8 520 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 PTCD2Q8WV60 388 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 SMARCD1Q96GM5 515 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 SPATA17Q96L03 361 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 C8orf48Q96LL4 319 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 ZNF512Q96ME7 567 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 PCMTD1Q96MG8 357 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 MED10Q9BTT4 135 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 STK33Q9BYT3 514 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 ZNF518BQ9C0D4 1074 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 CSNK1G1Q9HCP0 422 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 AVENQ9NQS1 362 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 FAM207AQ9NSI2 230 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 FAM49BQ9NUQ9 324 aa12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 USP15Q9Y4E8 981 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-208ENST00000504489 FHOD1Q9Y613 1164 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms