RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 TGM1P22735 817 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 CST5P28325 142 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 TARDBPQ13148 414 aaKnown RBP eCLIP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 AMOTQ4VCS5 1084 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 LRRC24Q50LG9 513 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 USP39Q53GS9 565 aaKnown RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 RNFT1Q5M7Z0 435 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 RTP2Q5QGT7 225 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 SLC30A9Q6PML9 568 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 GBP6Q6ZN66 633 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 NUDT13Q86X67 352 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 DZIP1Q86YF9 867 aaKnown RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 KSR1Q8IVT5 923 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 DIS3L2Q8IYB7 885 aaKnown RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 SMYD4Q8IYR2 804 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 TMCO5AQ8N6Q1 288 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 BANPQ8N9N5 519 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 TDRD5Q8NAT2 981 aaKnown RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 KTI12Q96EK9 354 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 COG3Q96JB2 828 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 CLPTM1LQ96KA5 538 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 MRGPRX1Q96LB2 322 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 ABHD16BQ9H3Z7 469 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 PIDD1Q9HB75 910 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 ANAPC5Q9UJX4 755 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 TDRD9Q8NDG6 1382 aaKnown RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 TRIM43BA6NCK2 446 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 ACTL6BO94805 426 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 RAB6AP20340 208 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 SLC13A2Q13183 592 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 GPR19Q15760 415 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 PREPLQ4J6C6 727 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 TIGD7Q6NT04 549 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 CLEC2AQ6UVW9 174 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 MRPS27Q92552 414 aaKnown RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 TRIM43Q96BQ3 446 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 NEIL1Q96FI4 390 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 FOXP3Q9BZS1 431 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 CHODLQ9H9P2 273 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 CD93Q9NPY3 652 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 DSEQ9UL01 958 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 WNT10BO00744 389 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 PPP1R11O60927 126 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 ALBP02768 609 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 GHRP10912 638 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 PTPN2P17706 415 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 ZNF41P51814 821 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 RPS3AP61247 264 aaKnown RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 ZBTB16Q05516 673 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 CDK5R2Q13319 367 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 TMTC4Q5T4D3 741 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 TPGS2Q68CL5 300 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 DRICH1Q6PGQ1 229 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 KCNV1Q6PIU1 500 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 ZYG11AQ6WRX3 759 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 SYT13Q7L8C5 426 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 BICD1Q96G01 975 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 UIMC1Q96RL1 719 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 CDADC1Q9BWV3 514 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 FUT8Q9BYC5 575 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 SAYSD1Q9NPB0 183 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 ZNHIT6Q9NWK9 470 aaKnown RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 UCKL1Q9NWZ5 548 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 CLIP2Q9UDT6 1046 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 GDF2Q9UK05 429 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 SMG5Q9UPR3 1016 aaKnown RBP5.6□□□□□ -1.51
NIPBL-204ENST00000504430 TRAV34A0A0B4J273 112 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 IKBKBO14920 756 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 CCP110O43303 1012 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 SRGAP2BP0DMP2 458 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 PECAM1P16284 738 aaPredicted RBP5.59□□□□□ -1.51
NIPBL-204ENST00000504430 HLA-DPA1P20036 260 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 RPA1P27694 616 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 GP5P40197 560 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 ATP8B2P98198 1209 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 LSAMPQ13449 338 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 PRAMEF14Q5SWL7 426 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 INTS5Q6P9B9 1019 aaKnown RBP5.59□□□□□ -1.51
NIPBL-204ENST00000504430 MIGA2Q7L4E1 593 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 FAM129CQ86XR2 697 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 DCBLD1Q8N8Z6 715 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 FANCBQ8NB91 859 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 SUN5Q8TC36 379 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 DEPDC1BQ8WUY9 529 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 METTL21AQ8WXB1 218 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 TTC9Q92623 222 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 MIEF2Q96C03 454 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 UHRF1Q96T88 793 aaPredicted RBP5.59□□□□□ -1.51
NIPBL-204ENST00000504430 B3GNT4Q9C0J1 378 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 KCNF1Q9H3M0 494 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 PRDM8Q9NQV8 689 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 DTNAQ9Y4J8 743 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 FPGT-TNNI3KV9GXZ4 949 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 KDRP35968 1356 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 IL16Q14005 1332 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 WDR19Q8NEZ3 1342 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 SGK1O00141 431 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 CEP104O60308 925 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 LMNAP02545 664 aaKnown RBP5.59□□□□□ -1.51
NIPBL-204ENST00000504430 SUPT20HL2P0C7V6 817 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms