RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 K7ENM7 598 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 PPEF1O14829 653 aaPredicted RBP3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF185O15231 689 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 ST8SIA5O15466 376 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 ATP9AO75110 1047 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 CA4P22748 312 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 TRHRP34981 398 aaPredicted RBP3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 CASP2P42575 452 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 ATP5OP48047 213 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 OSTNP61366 133 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 NCALDP61601 193 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 MRPS35P82673 323 aaKnown RBP3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 KDSRQ06136 332 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 GABPAQ06546 454 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 C19orf57Q0VDD7 668 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 MAP7Q14244 749 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF124Q15973 351 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 GRAMD1BQ3KR37 738 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 TUBB8Q3ZCM7 444 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 EFHC1Q5JVL4 640 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 FCRLBQ6BAA4 426 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 NFRKBQ6P4R8 1299 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 LYPD8Q6UX82 237 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 KCTD20Q7Z5Y7 419 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 PIGWQ7Z7B1 504 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 NPAS4Q8IUM7 802 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 FBXL6Q8N531 539 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 OXER1Q8TDS5 423 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 RPRD1AQ96P16 312 aaPredicted RBP3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 OPALINQ96PE5 141 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 LPIN3Q9BQK8 851 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 SYT17Q9BSW7 474 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 ISCA1Q9BUE6 129 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 ADAM7Q9H2U9 754 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 DENND2DQ9H6A0 471 aaPredicted RBP3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 SENP1Q9P0U3 644 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 PDP2Q9P2J9 529 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 ANKFY1Q9P2R3 1169 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 PCDHGB4Q9UN71 923 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 PCDHGB5Q9Y5G0 923 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 PCDHA1Q9Y5I3 950 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 A0A0G2JND7 137 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 CLRN2A0PK11 232 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 USP17L3A6NCW0 530 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 USP17L4A6NCW7 530 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 TRIM64BA6NI03 449 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 LRRIQ4A6NIV6 560 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 SGK1O00141 431 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 FOXN3O00409 490 aaPredicted RBP3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 NOP56O00567 594 aaKnown RBP3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 PRMT3O60678 531 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 PLEKHA8P1O95397 391 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 FGGP02679 453 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 GSTA1P08263 222 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 GSTA2P09210 222 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 POU2F1P14859 743 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 ATF2P15336 505 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 PCSK2P16519 638 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 POLR2CP19387 275 aaPredicted RBP3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 GRM5P41594 1212 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 MASP1P48740 699 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 CCR3P51677 355 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 EPHB4P54760 987 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 SLC12A2P55011 1212 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 DR1Q01658 176 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 ROR1Q01973 937 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 MGAT5Q09328 741 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 TSTA3Q13630 321 aaPredicted RBP3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 NECTIN1Q15223 517 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 TOMM20Q15388 145 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 UBE2SQ16763 222 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 ERAP2Q6P179 960 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 TMEM154Q6P9G4 183 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 CORO6Q6QEF8 472 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 USP17L1Q7RTZ2 530 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 GALNT7Q86SF2 657 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF34Q8IZ26 560 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 CEP70Q8NHQ1 597 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 ANGPTL6Q8NI99 470 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 TBCKQ8TEA7 893 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 TANKQ92844 425 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 PMEPA1Q969W9 287 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 TMIGD2Q96BF3 282 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 SH2D3AQ9BRG2 576 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 BRIP1Q9BX63 1249 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 FAM126AQ9BYI3 521 aaPredicted RBP3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 FHDC1Q9C0D6 1143 aaPredicted RBP3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 SENP6Q9GZR1 1112 aaPredicted RBP3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 CDH19Q9H159 772 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 PTPRHQ9HD43 1115 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 KCNQ5Q9NR82 932 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 USP40Q9NVE5 1235 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 EURLQ9NYK6 297 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 FNIP2Q9P278 1114 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 TRIM10Q9UDY6 481 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 GTF2IRD1Q9UHL9 959 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 RABGEF1Q9UJ41 708 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 ANAPC5Q9UJX4 755 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 MKL2Q9ULH7 1088 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 PLAAQ9Y263 795 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms