RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 RESP18Q5W5W9 173 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 CTRB2Q6GPI1 263 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 SWSAP1Q6NVH7 229 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 C1orf228Q6PIY5 440 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 TRAPPC11Q7Z392 1133 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 PATL1Q86TB9 770 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 CATSPER3Q86XQ3 398 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 SLC38A6Q8IZM9 456 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 DDHD1Q8NEL9 900 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 SNX29Q8TEQ0 813 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 RAPGEF5Q92565 580 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 EFHD2Q96C19 240 aaPredicted RBP10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 DYDC2Q96IM9 177 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 LXNQ9BS40 222 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 MTG1Q9BT17 334 aaPredicted RBP10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 TMEM106CQ9BVX2 250 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 DNAI2Q9GZS0 605 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 ERAP1Q9NZ08 941 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 KBTBD13C9JR72 458 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 H3BRB1 525 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 DKC1O60832 514 aaKnown RBP eCLIP10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 PEX11AO75192 247 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 CDC25AP30304 524 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 HOXC8P31273 242 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 EPHB4P54760 987 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 ITGA9Q13797 1035 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 ECM1Q16610 540 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 GSTA3Q16772 222 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 GALNTL6Q49A17 601 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 ZC2HC1CQ53FD0 456 aaPredicted RBP10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 KRT79Q5XKE5 535 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 USP49Q70CQ1 688 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 TRPM8Q7Z2W7 1104 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 CPLX4Q7Z7G2 160 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 SLC51BQ86UW2 128 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 HCAR2Q8TDS4 363 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 SYMPKQ92797 1274 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 PNMA5Q96PV4 448 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 MMS19Q96T76 1030 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 KATNAL1Q9BW62 490 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 RAB17Q9H0T7 212 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 HSD3B7Q9H2F3 369 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 AZI2Q9H6S1 392 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 HPSEQ9Y251 543 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 DNAJC16Q9Y2G8 782 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 MROH7Q68CQ1 1323 aa10.08□□□□□ -0.8
PDLIM5-207ENST00000503974 A0A1W2PQ45 241 aaPredicted RBP10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 A0A1W2PQY0 241 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 POTEB3A0JP26 581 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 CCDC169A6NNP5 214 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 BACH1O14867 736 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 NVLO15381 856 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 MYL3P08590 195 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 CMA1P23946 247 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 CENPAP49450 140 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 PSEN2P49810 448 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 CDK7P50613 346 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 PRKCEQ02156 737 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 GRB10Q13322 594 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 STK11Q15831 433 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 ZNF423Q2M1K9 1284 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 FAM133BQ5BKY9 247 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 PDXDC2PQ6P474 469 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 TUBA3EQ6PEY2 450 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 POTEBQ6S5H4 581 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 CXCL17Q6UXB2 119 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 ANKMY2Q8IV38 441 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 NUP93Q8N1F7 819 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 PTCD2Q8WV60 388 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 HSPBAP1Q96EW2 488 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 FAM167AQ96KS9 214 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 FBXL18Q96ME1 805 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 CIB1Q99828 191 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 AIFM2Q9BRQ8 373 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 ECT2Q9H8V3 914 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 CNGB3Q9NQW8 809 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 CFL2Q9Y281 166 aa10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 KIAA0100Q14667 2235 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-207ENST00000503974 GOLGA8IPA6NC78 632 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 IDH3BO43837 385 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 PAHP00439 452 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 ABCB1P08183 1280 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 PABPC1P11940 636 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 UBA7P41226 1012 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 SEPT6Q14141 434 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 CTTNQ14247 550 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 MFSD10Q14728 455 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 XKR3Q5GH77 459 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 ASRGL1Q7L266 308 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 PIGWQ7Z7B1 504 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 CROCCP3Q8IVE0 287 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 NATD1Q8N6N6 113 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 ARL6IP6Q8N6S5 226 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 APPL2Q8NEU8 664 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 LRRC15Q8TF66 581 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 GLG1Q92896 1179 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 KLHL29Q96CT2 875 aa10.06□□□□□ -0.8
PDLIM5-207ENST00000503974 IFT74Q96LB3 600 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms