RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 KRT82Q9NSB4 513 aa18.93■□□□□ 0.62
CCHCR1-216ENST00000502557 AJAP1Q9UKB5 411 aaPredicted RBP18.93■□□□□ 0.62
CCHCR1-216ENST00000502557 SLC38A8A6NNN8 435 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 C2CD4DB7Z1M9 353 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 LOC730098B7Z3J9 87 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 F8VP50 259 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 RNF225M0QZC1 329 aaPredicted RBP18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 NRG2O14511 850 aaPredicted RBP18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 TRIM66O15016 1216 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 MYL4P12829 197 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 HMGA1P17096 107 aaKnown RBP18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 CCR2P41597 374 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 ZNF132P52740 706 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 PPP1R26Q5T8A7 1209 aaPredicted RBP18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 CYP4A22Q5TCH4 519 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 KLHDC7AQ5VTJ3 777 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 PDZD4Q76G19 769 aaPredicted RBP18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 LEMD2Q8NC56 503 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 RBBP8NLQ8NC74 664 aaPredicted RBP18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 TCEAL4Q96EI5 215 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 SMARCD1Q96GM5 515 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 SPATA17Q96L03 361 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 FAM81BQ96LP2 452 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 MYADMQ96S97 322 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 SMOQ99835 787 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 DNAJC12Q9UKB3 198 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 CNTN6Q9UQ52 1028 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 USTQ9Y2C2 406 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 MRPS23Q9Y3D9 190 aaKnown RBP18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 NR2E1Q9Y466 385 aa18.92■□□□□ 0.62
CCHCR1-216ENST00000502557 MOSPD3O75425 235 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 AP1G2O75843 785 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 NOL4O94818 638 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 PAEPP09466 180 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 CSH1P0DML2 217 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 CSH2P0DML3 217 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 ANXA13P27216 316 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 KLK7P49862 253 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 ZNF445P59923 1031 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 TAF12Q16514 161 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 ARHGAP44Q17R89 818 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 ARHGAP17Q68EM7 881 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 OTOP3Q7RTS5 596 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 TDRD5Q8NAT2 981 aaKnown RBP18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 ZMIZ2Q8NF64 920 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 CEP295NLQ96MC4 621 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 KCNK16Q96T55 309 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 UHRF1Q96T88 793 aaPredicted RBP18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 IL21Q9HBE4 155 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 DMAP1Q9NPF5 467 aaPredicted RBP18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 SIK3Q9Y2K2 1263 aa18.91■□□□□ 0.62
CCHCR1-216ENST00000502557 BRWD1Q9NSI6 2320 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 ZNF197O14709 1029 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 BEST1O76090 585 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 FAM200BP0CF97 657 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 CD19P15391 556 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 CEBPBP17676 345 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 GBP2P32456 591 aaPredicted RBP18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 TPM4P67936 248 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 UBXN1Q04323 297 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 SGO2Q562F6 1265 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 SHKBP1Q8TBC3 707 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 ING5Q8WYH8 240 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 TFAP2BQ92481 460 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 SHC3Q92529 594 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 ACSF2Q96CM8 615 aaPredicted RBP18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 CSNK1G1Q9HCP0 422 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 CD320Q9NPF0 282 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 PLCB1Q9NQ66 1216 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.9■□□□□ 0.625e-30■■■■■ 28.6
CCHCR1-216ENST00000502557 CDH7Q9ULB5 785 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 KIAA1257Q9ULG3 409 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 MAGED2Q9UNF1 606 aaPredicted RBP18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 FHOD1Q9Y613 1164 aa18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 SPTBN5Q9NRC6 3674 aaKnown RBP18.9■□□□□ 0.62
CCHCR1-216ENST00000502557 PRUNE2Q8WUY3 3088 aa18.89■□□□□ 0.62
CCHCR1-216ENST00000502557 MICAL2O94851 1124 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 CALCAP01258 141 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 VDRP11473 427 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 KRT5P13647 590 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 GJA1P17302 382 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 MAP3K7CLP57077 242 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 USP46P62068 366 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 SYCP1Q15431 976 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 POTEHQ6S545 545 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 CLEC20AQ6ZU45 233 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 DENND5BQ6ZUT9 1274 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 GAREM2Q75VX8 874 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 NPAS3Q8IXF0 933 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 FGF13Q92913 245 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 TRMT2BQ96GJ1 504 aaKnown RBP18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 MYRFLQ96LU7 910 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 ERGIC2Q96RQ1 377 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 ZSWIM1Q9BR11 485 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 NAA15Q9BXJ9 866 aaKnown RBP18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 GANQ9H2C0 597 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 RTN4Q9NQC3 1192 aaKnown RBP18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 XIRP2A4UGR9 3374 aa18.89■□□□□ 0.61
CCHCR1-216ENST00000502557 A0A1W2PRU2 124 aa18.88■□□□□ 0.61
CCHCR1-216ENST00000502557 GOLGA6L19H0YKK7 550 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms