RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 NT5DC4Q86YG4 428 aa15.74■□□□□ 0.11
SEC61A1-207ENST00000498837 C1orf127Q8N9H9 656 aa15.74■□□□□ 0.11
SEC61A1-207ENST00000498837 RASSF8Q8NHQ8 419 aa15.74■□□□□ 0.11
SEC61A1-207ENST00000498837 SH3RF2Q8TEC5 729 aa15.74■□□□□ 0.11
SEC61A1-207ENST00000498837 LARP4BQ92615 738 aaKnown RBP15.74■□□□□ 0.11
SEC61A1-207ENST00000498837 FAM213AQ9BRX8 229 aa15.74■□□□□ 0.11
SEC61A1-207ENST00000498837 ABCB6Q9NP58 842 aa15.74■□□□□ 0.11
SEC61A1-207ENST00000498837 PPP4R2Q9NY27 417 aa15.74■□□□□ 0.11
SEC61A1-207ENST00000498837 WASF3Q9UPY6 502 aa15.74■□□□□ 0.11
SEC61A1-207ENST00000498837 SPEGQ15772 3267 aa15.74■□□□□ 0.11
SEC61A1-207ENST00000498837 H3BQV1 296 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 K7EQS6 105 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 CDX4O14627 284 aaPredicted RBP15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 BCKDHBP21953 392 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 GJB2P29033 226 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 OPRD1P41143 372 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 SEC13P55735 322 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 MYL7Q01449 175 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 ZNF252P-AS1Q0IIN9 211 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 USP39Q53GS9 565 aaKnown RBP15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 C2orf27AQ580R0 203 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 DAB2IPQ5VWQ8 1189 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 UNQ6494/PRO21346Q6UXR6 183 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 SCN4BQ8IWT1 228 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 TSTD1Q8NFU3 115 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 CXorf38Q8TB03 319 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 USP33Q8TEY7 942 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 SAAL1Q96ER3 474 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 STRA6Q9BX79 667 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 ZMIZ1Q9ULJ6 1067 aa15.73■□□□□ 0.11
SEC61A1-207ENST00000498837 KHNYNO15037 678 aaKnown RBP15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 PPP1R37O75864 691 aa15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 NEFLP07196 543 aa15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 HDCP19113 662 aa15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 DDIT3P35638 169 aa15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 LONP1P36776 959 aaKnown RBP15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 IRX4P78413 519 aa15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 ZXDBP98169 803 aa15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 NR1H3Q13133 447 aa15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 POSTNQ15063 836 aa15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 ANO7Q6IWH7 933 aa15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 SPATA2LQ8IUW3 424 aaPredicted RBP15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 TMEM86AQ8N2M4 240 aa15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 CCDC33Q8N5R6 958 aa15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 CSGALNACT2Q8N6G5 542 aa15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 KRI1Q8N9T8 703 aaKnown RBP15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 TBC1D7Q9P0N9 293 aa15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 SNX9Q9Y5X1 595 aa15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 PKD1L2Q7Z442 2459 aa15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 DSPP15924 2871 aaKnown RBP15.72■□□□□ 0.11
SEC61A1-207ENST00000498837 GOLGA8IPA6NC78 632 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 GOLGA8JA6NMD2 632 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 ATP2C2O75185 946 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 HNRNPLP14866 589 aaKnown RBP eCLIP15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 KCNB1Q14721 858 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 GAB4Q2WGN9 574 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 CFAP221Q4G0U5 840 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 USP49Q70CQ1 688 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 CYP2U1Q7Z449 544 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 RASSF3Q86WH2 238 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 BRSK2Q8IWQ3 736 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 FSIP1Q8NA03 581 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 MDGA1Q8NFP4 955 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 CACTINQ8WUQ7 758 aaKnown RBP15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 HVCN1Q96D96 273 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 EPSTI1Q96J88 318 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 TMEM121BQ9BXQ6 578 aaPredicted RBP15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 TMEM9BQ9NQ34 198 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 GDAP2Q9NXN4 497 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 SIX4Q9UIU6 781 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 DMXL2Q8TDJ6 3036 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 WDFY3Q8IZQ1 3526 aa15.71■□□□□ 0.11
SEC61A1-207ENST00000498837 GABRDO14764 452 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 NFATC1O95644 943 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 KRT19P08727 400 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 TCF3P15923 654 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 DHPSP49366 369 aaPredicted RBP15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 SOWAHAQ2M3V2 549 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 UAP1L1Q3KQV9 507 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 FAM171BQ6P995 826 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 TMEM92Q6UXU6 159 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 TTC30AQ86WT1 665 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 SFTPA1Q8IWL2 248 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 ADGRF2Q8IZF7 708 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 LRRC52Q8N7C0 313 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 PIGKQ92643 395 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 TMX3Q96JJ7 454 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 CNOT6LQ96LI5 555 aaKnown RBP15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 MRPL44Q9H9J2 332 aaKnown RBP15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 PDE11AQ9HCR9 933 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 MMP17Q9ULZ9 603 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 ARHGAP26Q9UNA1 814 aa15.7■□□□□ 0.1
SEC61A1-207ENST00000498837 LEFTY2O00292 366 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 CEACAM1P13688 526 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 CSRP1P21291 193 aaKnown RBP15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 LMO2P25791 158 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 PCSK1P29120 753 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 MAGEA11P43364 429 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 SLC6A11P48066 632 aa15.69■□□□□ 0.1
SEC61A1-207ENST00000498837 LHX1P48742 406 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms