RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 TRIM7Q9C029 511 aa7.5□□□□□ -1.21
GPATCH4-209ENST00000498641 ABCB6Q9NP58 842 aa7.5□□□□□ -1.21
GPATCH4-209ENST00000498641 IL23AQ9NPF7 189 aa7.5□□□□□ -1.21
GPATCH4-209ENST00000498641 CRTAC1Q9NQ79 661 aa7.5□□□□□ -1.21
GPATCH4-209ENST00000498641 TJP2Q9UDY2 1190 aa7.5□□□□□ -1.21
GPATCH4-209ENST00000498641 ADAM28Q9UKQ2 775 aa7.5□□□□□ -1.21
GPATCH4-209ENST00000498641 USTQ9Y2C2 406 aa7.5□□□□□ -1.21
GPATCH4-209ENST00000498641 CITO14578 2027 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 CCDC66A2RUB6 948 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 ZBBXA8MT70 800 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 NT5C1B-RDH14C9J2C7 533 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 E5RJQ4 531 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 TULP2O00295 520 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 XPO1O14980 1071 aaKnown RBP7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 SYN3O14994 580 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 AP1G2O75843 785 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 DGKIO75912 1065 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 BAIAP3O94812 1187 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 FGBP02675 491 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 GALTP07902 379 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 NPR3P17342 541 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 DESP17661 470 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 PSMA2P25787 234 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 RFC1P35251 1148 aaPredicted RBP7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 PBX3P40426 434 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 MAP3K7CLP57077 242 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 WDR5P61964 334 aaKnown RBP7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 RPL7AP62424 266 aaKnown RBP7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 PLCB3Q01970 1234 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 ELAVL2Q12926 359 aaKnown RBP7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 PPIGQ13427 754 aaKnown RBP eCLIP7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 PIGHQ14442 188 aaPredicted RBP7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 CCDC142Q17RM4 750 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 INTS6LQ5JSJ4 861 aaKnown RBP7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 COL13A1Q5TAT6 717 aaPredicted RBP7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 FAM171A1Q5VUB5 890 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 FAM183BPQ6ZVS7 135 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 OTOP2Q7RTS6 562 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 TMEM110Q86TL2 294 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 SPATA2LQ8IUW3 424 aaPredicted RBP7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 SCUBE3Q8IX30 993 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 C7orf61Q8IZ16 206 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 DCP1BQ8IZD4 617 aaKnown RBP7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 FUKQ8N0W3 1084 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 BADQ92934 168 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 TOP1MTQ969P6 601 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 MYLPFQ96A32 169 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 MCRS1Q96EZ8 462 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 PCED1BQ96HM7 432 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 HES6Q96HZ4 224 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 HSFY1Q96LI6 401 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 RTP3Q9BQQ7 232 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 SLC4A5Q9BY07 1137 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 LRRC4Q9HBW1 653 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 METTL5Q9NRN9 209 aaKnown RBP7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 KRT82Q9NSB4 513 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 HCSTQ9UBK5 93 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 RNF14Q9UBS8 474 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 HTTP42858 3142 aa7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 SF3B1O75533 1304 aaKnown RBP eCLIP7.49□□□□□ -1.21
GPATCH4-209ENST00000498641 TCRBV5S1A1TA0A578 114 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 EFCAB8A8MWE9 144 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 H7C4K7 107 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 CES2O00748 559 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 DDX3YO15523 660 aaKnown RBP7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 GRAP2O75791 330 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 OAZ2O95190 189 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 BDNFP23560 247 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 CTNNA2P26232 953 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 MAN1A1P33908 653 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 GJC1P36383 396 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 PLA2G4AP47712 749 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 ARPP19P56211 112 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 GSCP56915 257 aaPredicted RBP7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 RWDD2BP57060 319 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 TUBB4BP68371 445 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 DEFB103AP81534 67 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 SLC6A3Q01959 620 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 FPGSQ05932 587 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 BTG3Q14201 252 aaPredicted RBP7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 CTXN3Q4LDR2 81 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 SLC39A12Q504Y0 691 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 ODF2Q5BJF6 829 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 VARS2Q5ST30 1063 aaKnown RBP7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 PPP1R15BQ5SWA1 713 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 TEX35Q5T0J7 233 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 ZFYVE27Q5T4F4 411 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 ZNF280DQ6N043 979 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 CC2D1AQ6P1N0 951 aaPredicted RBP7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 FUT10Q6P4F1 479 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 FAM171BQ6P995 826 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 C4orf50Q6ZRC1 276 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 CLEC20AQ6ZU45 233 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 PAQR9Q6ZVX9 377 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 TMCO2Q7Z6W1 182 aaPredicted RBP7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 UBE2Q1Q7Z7E8 422 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 FAM35AQ86V20 835 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 PIGZQ86VD9 579 aa7.48□□□□□ -1.21
GPATCH4-209ENST00000498641 CPNE8Q86YQ8 564 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms