RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 DAB2IPQ5VWQ8 1189 aa15.78■□□□□ 0.12
TRAF4-212ENST00000498540 ANO7Q6IWH7 933 aa15.78■□□□□ 0.12
TRAF4-212ENST00000498540 ZNF720Q7Z2F6 126 aa15.78■□□□□ 0.12
TRAF4-212ENST00000498540 RASSF3Q86WH2 238 aa15.78■□□□□ 0.12
TRAF4-212ENST00000498540 CXorf38Q8TB03 319 aa15.78■□□□□ 0.12
TRAF4-212ENST00000498540 USP33Q8TEY7 942 aa15.78■□□□□ 0.12
TRAF4-212ENST00000498540 SAAL1Q96ER3 474 aa15.78■□□□□ 0.12
TRAF4-212ENST00000498540 FAM213AQ9BRX8 229 aa15.78■□□□□ 0.12
TRAF4-212ENST00000498540 TMEM121BQ9BXQ6 578 aaPredicted RBP15.78■□□□□ 0.12
TRAF4-212ENST00000498540 TMEM9BQ9NQ34 198 aa15.78■□□□□ 0.12
TRAF4-212ENST00000498540 BAHCC1Q9P281 2608 aa15.78■□□□□ 0.12
TRAF4-212ENST00000498540 H3BQV1 296 aa15.77■□□□□ 0.12
TRAF4-212ENST00000498540 K7EQS6 105 aa15.77■□□□□ 0.12
TRAF4-212ENST00000498540 CDX4O14627 284 aaPredicted RBP15.77■□□□□ 0.12
TRAF4-212ENST00000498540 KHNYNO15037 678 aaKnown RBP15.77■□□□□ 0.12
TRAF4-212ENST00000498540 HUS1O60921 280 aa15.77■□□□□ 0.12
TRAF4-212ENST00000498540 ZXDBP98169 803 aa15.77■□□□□ 0.12
TRAF4-212ENST00000498540 MYL7Q01449 175 aa15.77■□□□□ 0.12
TRAF4-212ENST00000498540 KCNB1Q14721 858 aa15.77■□□□□ 0.12
TRAF4-212ENST00000498540 GAB4Q2WGN9 574 aa15.77■□□□□ 0.12
TRAF4-212ENST00000498540 CFAP221Q4G0U5 840 aa15.77■□□□□ 0.12
TRAF4-212ENST00000498540 USP39Q53GS9 565 aaKnown RBP15.77■□□□□ 0.12
TRAF4-212ENST00000498540 DYMQ7RTS9 669 aa15.77■□□□□ 0.12
TRAF4-212ENST00000498540 CYP2U1Q7Z449 544 aa15.77■□□□□ 0.12
TRAF4-212ENST00000498540 BRSK2Q8IWQ3 736 aa15.77■□□□□ 0.12
TRAF4-212ENST00000498540 SCN4BQ8IWT1 228 aa15.77■□□□□ 0.12
TRAF4-212ENST00000498540 TMEM86AQ8N2M4 240 aa15.77■□□□□ 0.12
TRAF4-212ENST00000498540 MDGA1Q8NFP4 955 aa15.77■□□□□ 0.12
TRAF4-212ENST00000498540 HVCN1Q96D96 273 aa15.77■□□□□ 0.12
TRAF4-212ENST00000498540 CNOT6LQ96LI5 555 aaKnown RBP15.77■□□□□ 0.12
TRAF4-212ENST00000498540 STRA6Q9BX79 667 aa15.77■□□□□ 0.12
TRAF4-212ENST00000498540 ASCC3Q8N3C0 2202 aaKnown RBP15.76■□□□□ 0.11
TRAF4-212ENST00000498540 NEFLP07196 543 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 HNRNPLP14866 589 aaKnown RBP eCLIP15.76■□□□□ 0.11
TRAF4-212ENST00000498540 TCF3P15923 654 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 GJB2P29033 226 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 LONP1P36776 959 aaKnown RBP15.76■□□□□ 0.11
TRAF4-212ENST00000498540 IRX4P78413 519 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 NR1H3Q13133 447 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 POSTNQ15063 836 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 C11orf74Q86VG3 221 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 SPATA2LQ8IUW3 424 aaPredicted RBP15.76■□□□□ 0.11
TRAF4-212ENST00000498540 SFTPA1Q8IWL2 248 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 ADGRF2Q8IZF7 708 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 CCDC33Q8N5R6 958 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 LRRC52Q8N7C0 313 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 KRI1Q8N9T8 703 aaKnown RBP15.76■□□□□ 0.11
TRAF4-212ENST00000498540 FSIP1Q8NA03 581 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 KDF1Q8NAX2 398 aaPredicted RBP15.76■□□□□ 0.11
TRAF4-212ENST00000498540 ADAM33Q9BZ11 813 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 GDAP2Q9NXN4 497 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 PPP4R2Q9NY27 417 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 RBAKQ9NYW8 714 aaPredicted RBP15.76■□□□□ 0.11
TRAF4-212ENST00000498540 SIX4Q9UIU6 781 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 MMP17Q9ULZ9 603 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 ARHGAP26Q9UNA1 814 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 SNX9Q9Y5X1 595 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 ZFYVE26Q68DK2 2539 aa15.76■□□□□ 0.11
TRAF4-212ENST00000498540 GABRDO14764 452 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 ATP2C2O75185 946 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 NFATC1O95644 943 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 KRT19P08727 400 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 CEACAM1P13688 526 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 HDCP19113 662 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 CSRP1P21291 193 aaKnown RBP15.75■□□□□ 0.11
TRAF4-212ENST00000498540 DDIT3P35638 169 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 DHPSP49366 369 aaPredicted RBP15.75■□□□□ 0.11
TRAF4-212ENST00000498540 MESP2Q0VG99 397 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 SOWAHAQ2M3V2 549 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 TMEM92Q6UXU6 159 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 TTC30AQ86WT1 665 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 CSGALNACT2Q8N6G5 542 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 PIGKQ92643 395 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 FUBP3Q96I24 572 aaKnown RBP eCLIP15.75■□□□□ 0.11
TRAF4-212ENST00000498540 MTMR12Q9C0I1 747 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 MRPL44Q9H9J2 332 aaKnown RBP15.75■□□□□ 0.11
TRAF4-212ENST00000498540 TBC1D7Q9P0N9 293 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 ITGA11Q9UKX5 1188 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 ATRXP46100 2492 aa15.75■□□□□ 0.11
TRAF4-212ENST00000498540 PLXND1Q9Y4D7 1925 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 MYOFQ9NZM1 2061 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 GOLGA8IPA6NC78 632 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 GOLGA8JA6NMD2 632 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 LEFTY2O00292 366 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 CYP17A1P05093 508 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 CHRM1P11229 460 aaPredicted RBP15.74■□□□□ 0.11
TRAF4-212ENST00000498540 HOXB3P14651 431 aaPredicted RBP15.74■□□□□ 0.11
TRAF4-212ENST00000498540 PCSK1P29120 753 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 MAGEA11P43364 429 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 LHX1P48742 406 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 CASP5P51878 434 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 USP46P62068 366 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 PSMC1P62191 440 aaKnown RBP15.74■□□□□ 0.11
TRAF4-212ENST00000498540 CRY1Q16526 586 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 UAP1L1Q3KQV9 507 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 L1TD1Q5T7N2 865 aaKnown RBP15.74■□□□□ 0.11
TRAF4-212ENST00000498540 FAM171BQ6P995 826 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 USP49Q70CQ1 688 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 TOP6BLQ8N6T0 577 aa15.74■□□□□ 0.11
TRAF4-212ENST00000498540 DEFB124Q8NES8 71 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms