RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 PATJQ8NI35 1801 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 MICAL2O94851 1124 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 LAMP2P13473 410 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 PTPN1P18031 435 aaKnown RBP11.98□□□□□ -0.49
ERCC8-208ENST00000497892 CYP2F1P24903 491 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 CCR2P41597 374 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 MAGEA11P43364 429 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 VEPH1Q14D04 833 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 MDH1BQ5I0G3 518 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 BLOC1S3Q6QNY0 202 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 VSTM1Q6UX27 236 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 PDZD4Q76G19 769 aaPredicted RBP11.98□□□□□ -0.49
ERCC8-208ENST00000497892 ITIH5Q86UX2 942 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 UNC93AQ86WB7 457 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 NPAS3Q8IXF0 933 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 ITFG1Q8TB96 612 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 TNIP3Q96KP6 325 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 LPIN3Q9BQK8 851 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 LRRC3Q9BY71 257 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 TMEM63CQ9P1W3 806 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 HMGXB4Q9UGU5 601 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 MUTYHQ9UIF7 546 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 MRPS23Q9Y3D9 190 aaKnown RBP11.98□□□□□ -0.49
ERCC8-208ENST00000497892 TRIOO75962 3097 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 DENND4CQ5VZ89 1909 aa11.98□□□□□ -0.49
ERCC8-208ENST00000497892 ZNF197O14709 1029 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 P4HA2O15460 535 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 DCXO43602 365 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 CEBPBP17676 345 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 GGCXP38435 758 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 NDST1P52848 882 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 RPL10AP62906 217 aaKnown RBP11.97□□□□□ -0.49
ERCC8-208ENST00000497892 CYP27A1Q02318 531 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 KCNH2Q12809 1159 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 STX1AQ16623 288 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 PTPN21Q16825 1174 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 WDR44Q5JSH3 913 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 CYP4A22Q5TCH4 519 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 DNAJB7Q7Z6W7 309 aaPredicted RBP11.97□□□□□ -0.49
ERCC8-208ENST00000497892 IRF2BP1Q8IU81 584 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 FAM200AQ8TCP9 573 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 ING5Q8WYH8 240 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 ARID3AQ99856 593 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 ELOVL4Q9GZR5 314 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 THAP9Q9H5L6 903 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 FAM124BQ9H5Z6 455 aaPredicted RBP11.97□□□□□ -0.49
ERCC8-208ENST00000497892 ZNF334Q9HCZ1 680 aaPredicted RBP11.97□□□□□ -0.49
ERCC8-208ENST00000497892 MAGEC2Q9UBF1 373 aaPredicted RBP11.97□□□□□ -0.49
ERCC8-208ENST00000497892 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.97□□□□□ -0.49
ERCC8-208ENST00000497892 MYO10Q9HD67 2058 aa11.97□□□□□ -0.49
ERCC8-208ENST00000497892 NUP210Q8TEM1 1887 aaPredicted RBP11.97□□□□□ -0.49
ERCC8-208ENST00000497892 ANHXE9PGG2 379 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 PI4K2BG5E9Z4 385 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 NRG2O14511 850 aaPredicted RBP11.96□□□□□ -0.49
ERCC8-208ENST00000497892 CILPO75339 1184 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 MOSPD3O75425 235 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 FGF19O95750 216 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 AFPP02771 609 aaKnown RBP11.96□□□□□ -0.49
ERCC8-208ENST00000497892 MYL4P12829 197 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 ALADP13716 330 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 HMGA1P17096 107 aaKnown RBP11.96□□□□□ -0.49
ERCC8-208ENST00000497892 CD58P19256 250 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 BDNFP23560 247 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 GPR15P49685 360 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 CETN1Q12798 172 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 CUL2Q13617 745 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 HTR4Q13639 388 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 DDR2Q16832 855 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 TPD52L1Q16890 204 aaPredicted RBP11.96□□□□□ -0.49
ERCC8-208ENST00000497892 SASS6Q6UVJ0 657 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 ACOT1Q86TX2 421 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 FAM114A1Q8IWE2 563 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 CRYBG2Q8N1P7 616 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 TTC39CQ8N584 583 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 SHKBP1Q8TBC3 707 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 GPR152Q8TDT2 470 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 TCEAL4Q96EI5 215 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 CEP295NLQ96MC4 621 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 TWNKQ96RR1 684 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 ZNF518BQ9C0D4 1074 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 GDE1Q9NZC3 331 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 IGSF9Q9P2J2 1179 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 LIMD1Q9UGP4 676 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 SORCS3Q9UPU3 1222 aa11.96□□□□□ -0.49
ERCC8-208ENST00000497892 ATP8B3O60423 1300 aa11.95□□□□□ -0.5
ERCC8-208ENST00000497892 A0A1W2PRU2 124 aa11.95□□□□□ -0.5
ERCC8-208ENST00000497892 NOL4O94818 638 aa11.95□□□□□ -0.5
ERCC8-208ENST00000497892 ASGR2P07307 311 aa11.95□□□□□ -0.5
ERCC8-208ENST00000497892 CFHP08603 1231 aa11.95□□□□□ -0.5
ERCC8-208ENST00000497892 CSH1P0DML2 217 aa11.95□□□□□ -0.5
ERCC8-208ENST00000497892 CSH2P0DML3 217 aa11.95□□□□□ -0.5
ERCC8-208ENST00000497892 TRIM21P19474 475 aaKnown RBP11.95□□□□□ -0.5
ERCC8-208ENST00000497892 ORC1Q13415 861 aa11.95□□□□□ -0.5
ERCC8-208ENST00000497892 MTMR3Q13615 1198 aa11.95□□□□□ -0.5
ERCC8-208ENST00000497892 KLHL40Q2TBA0 621 aa11.95□□□□□ -0.5
ERCC8-208ENST00000497892 SDHAF4Q5VUM1 108 aa11.95□□□□□ -0.5
ERCC8-208ENST00000497892 CAVIN1Q6NZI2 390 aaKnown RBP11.95□□□□□ -0.5
ERCC8-208ENST00000497892 C11orf57Q6ZUT1 292 aaPredicted RBP11.95□□□□□ -0.5
ERCC8-208ENST00000497892 GAREM2Q75VX8 874 aa11.95□□□□□ -0.5
ERCC8-208ENST00000497892 FAM35AQ86V20 835 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms