RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 EHHADHQ08426 723 aa18.34■□□□□ 0.53
SMC4-226ENST00000497311 DMWDQ09019 674 aa18.34■□□□□ 0.53
SMC4-226ENST00000497311 GRSF1Q12849 480 aaKnown RBP eCLIP18.34■□□□□ 0.53
SMC4-226ENST00000497311 SIM2Q14190 667 aaPredicted RBP18.34■□□□□ 0.53
SMC4-226ENST00000497311 PDGFRLQ15198 375 aa18.34■□□□□ 0.53
SMC4-226ENST00000497311 TMEM196Q5HYL7 178 aa18.34■□□□□ 0.53
SMC4-226ENST00000497311 HEATR6Q6AI08 1181 aaKnown RBP18.34■□□□□ 0.53
SMC4-226ENST00000497311 VSTM1Q6UX27 236 aa18.34■□□□□ 0.53
SMC4-226ENST00000497311 HS2ST1Q7LGA3 356 aa18.34■□□□□ 0.53
SMC4-226ENST00000497311 RIN3Q8TB24 985 aa18.34■□□□□ 0.53
SMC4-226ENST00000497311 SCFD1Q8WVM8 642 aa18.34■□□□□ 0.53
SMC4-226ENST00000497311 MYLPFQ96A32 169 aa18.34■□□□□ 0.53
SMC4-226ENST00000497311 CYP2S1Q96SQ9 504 aa18.34■□□□□ 0.53
SMC4-226ENST00000497311 CGRRF1Q99675 332 aa18.34■□□□□ 0.53
SMC4-226ENST00000497311 BLZF1Q9H2G9 400 aa18.34■□□□□ 0.53
SMC4-226ENST00000497311 CRTAC1Q9NQ79 661 aa18.34■□□□□ 0.53
SMC4-226ENST00000497311 PCDHA7Q9UN72 937 aa18.34■□□□□ 0.53
SMC4-226ENST00000497311 TRAV19A0A0A6YYK7 116 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 OTOL1A6NHN0 477 aaPredicted RBP18.33■□□□□ 0.52
SMC4-226ENST00000497311 TRDMT1O14717 391 aaKnown RBP18.33■□□□□ 0.52
SMC4-226ENST00000497311 HRO43593 1189 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 CST3P01034 146 aaPredicted RBP18.33■□□□□ 0.52
SMC4-226ENST00000497311 CKMP06732 381 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 ARSAP15289 507 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 BDNFP23560 247 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 CASP1P29466 404 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 GRIK1P39086 918 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 ME1P48163 572 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 CYP27A1Q02318 531 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 CYP24A1Q07973 514 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 MTF1Q14872 753 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 PSMD6Q15008 389 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 ATL3Q6DD88 541 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 TTC16Q8NEE8 873 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 CCDC127Q96BQ5 260 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 SPATA17Q96L03 361 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 CEP295NLQ96MC4 621 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 SNX25Q9H3E2 840 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 SLC39A2Q9NP94 309 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 C2orf42Q9NWW7 574 aa18.33■□□□□ 0.52
SMC4-226ENST00000497311 CGNQ9P2M7 1197 aaKnown RBP18.33■□□□□ 0.52
SMC4-226ENST00000497311 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.32■□□□□ 0.52
SMC4-226ENST00000497311 PVALEFA0A1B0GWK0 134 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 PRR5-ARHGAP8B1AHC4 643 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 TACC1O75410 805 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 RETP07949 1114 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 TGM1P22735 817 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 ANXA13P27216 316 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 HOXA6P31267 233 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 GNL1P36915 607 aaPredicted RBP18.32■□□□□ 0.52
SMC4-226ENST00000497311 AFMP43652 599 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 ARHGAP8P85298 464 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 LMNB2Q03252 620 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 RESP18Q5W5W9 173 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 FSTL4Q6MZW2 842 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 CPA6Q8N4T0 437 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 MYCBPAPQ8TBZ2 947 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 OSCP1Q8WVF1 389 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 EXOC4Q96A65 974 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 CHFRQ96EP1 664 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 SLC22A12Q96S37 553 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 DUS2Q9NX74 493 aaKnown RBP18.32■□□□□ 0.52
SMC4-226ENST00000497311 CFAP45Q9UL16 551 aa18.32■□□□□ 0.52
SMC4-226ENST00000497311 ATG13O75143 517 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 FAM163BP0C2L3 166 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 TNNC1P63316 161 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 SPEM2Q0P670 501 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 SRSF5Q13243 272 aaKnown RBP18.31■□□□□ 0.52
SMC4-226ENST00000497311 TRPC3Q13507 836 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 CUL4BQ13620 913 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 KCNB1Q14721 858 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 ZNF77Q15935 545 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 KNOP1Q1ED39 458 aaKnown RBP18.31■□□□□ 0.52
SMC4-226ENST00000497311 BMT2Q1RMZ1 405 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 WDR72Q3MJ13 1102 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 DENND5BQ6ZUT9 1274 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 C12orf56Q8IXR9 622 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 ARL14EPQ8N8R7 260 aaPredicted RBP18.31■□□□□ 0.52
SMC4-226ENST00000497311 OR6B3Q8NGW1 331 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 PCED1BQ96HM7 432 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 MRPL45Q9BRJ2 306 aaKnown RBP18.31■□□□□ 0.52
SMC4-226ENST00000497311 ECT2Q9H8V3 914 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 PARD6AQ9NPB6 346 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 EHD2Q9NZN4 543 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 GCNT4Q9P109 453 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 ANAPC1Q9H1A4 1944 aa18.31■□□□□ 0.52
SMC4-226ENST00000497311 ATG2BQ96BY7 2078 aa18.3■□□□□ 0.52
SMC4-226ENST00000497311 GREB1Q4ZG55 1949 aa18.3■□□□□ 0.52
SMC4-226ENST00000497311 C2orf78A6NCI8 922 aa18.3■□□□□ 0.52
SMC4-226ENST00000497311 TRIM66O15016 1216 aa18.3■□□□□ 0.52
SMC4-226ENST00000497311 EXOC3O60645 756 aa18.3■□□□□ 0.52
SMC4-226ENST00000497311 EGFP01133 1207 aa18.3■□□□□ 0.52
SMC4-226ENST00000497311 HDCP19113 662 aa18.3■□□□□ 0.52
SMC4-226ENST00000497311 DRD1P21728 446 aa18.3■□□□□ 0.52
SMC4-226ENST00000497311 GJA4P35212 333 aa18.3■□□□□ 0.52
SMC4-226ENST00000497311 IFNAR2P48551 515 aa18.3■□□□□ 0.52
SMC4-226ENST00000497311 PDE6CP51160 858 aa18.3■□□□□ 0.52
SMC4-226ENST00000497311 GALK1P51570 392 aa18.3■□□□□ 0.52
SMC4-226ENST00000497311 USP4Q13107 963 aa18.3■□□□□ 0.52
SMC4-226ENST00000497311 MDH1BQ5I0G3 518 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms