RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 LNX2Q8N448 690 aa5.76□□□□□ -1.49
VPS36-206ENST00000497149 ASB10Q8WXI3 467 aa5.76□□□□□ -1.49
VPS36-206ENST00000497149 FAM136AQ96C01 138 aa5.76□□□□□ -1.49
VPS36-206ENST00000497149 ARPC5LQ9BPX5 153 aa5.76□□□□□ -1.49
VPS36-206ENST00000497149 MLST8Q9BVC4 326 aa5.76□□□□□ -1.49
VPS36-206ENST00000497149 WDR11Q9BZH6 1224 aa5.76□□□□□ -1.49
VPS36-206ENST00000497149 TPSD1Q9BZJ3 242 aa5.76□□□□□ -1.49
VPS36-206ENST00000497149 SERHL2Q9H4I8 314 aa5.76□□□□□ -1.49
VPS36-206ENST00000497149 CXorf36Q9H7Y0 433 aa5.76□□□□□ -1.49
VPS36-206ENST00000497149 DNMT3BQ9UBC3 853 aaKnown RBP5.76□□□□□ -1.49
VPS36-206ENST00000497149 DKK4Q9UBT3 224 aa5.76□□□□□ -1.49
VPS36-206ENST00000497149 MAN2B2Q9Y2E5 1009 aa5.76□□□□□ -1.49
VPS36-206ENST00000497149 CEP83Q9Y592 693 aa5.76□□□□□ -1.49
VPS36-206ENST00000497149 CDY1Q9Y6F8 540 aa5.76□□□□□ -1.49
VPS36-206ENST00000497149 TPD52L2O43399 206 aaKnown RBP5.75□□□□□ -1.49
VPS36-206ENST00000497149 RRP9O43818 475 aaKnown RBP5.75□□□□□ -1.49
VPS36-206ENST00000497149 ITGAMP11215 1152 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 PPP3CBP16298 524 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 TPH1P17752 444 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 EEF1GP26641 437 aaKnown RBP5.75□□□□□ -1.49
VPS36-206ENST00000497149 IL6STP40189 918 aaPredicted RBP5.75□□□□□ -1.49
VPS36-206ENST00000497149 HSPA7P48741 367 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 MAPK10P53779 464 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 SF3B3Q15393 1217 aaKnown RBP5.75□□□□□ -1.49
VPS36-206ENST00000497149 MPEG1Q2M385 716 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 PTCHD3Q3KNS1 767 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 ABHD17BQ5VST6 288 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 KRT28Q7Z3Y7 464 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 ENAHQ8N8S7 591 aaPredicted RBP5.75□□□□□ -1.49
VPS36-206ENST00000497149 VPS37AQ8NEZ2 397 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 SSH3Q8TE77 659 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 ZNF566Q969W8 418 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 LRRC46Q96FV0 321 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 GDF15Q99988 308 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 ZNF747Q9BV97 191 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 SELENOOQ9BVL4 669 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 EIF2AQ9BY44 585 aaKnown RBP5.75□□□□□ -1.49
VPS36-206ENST00000497149 WDR12Q9GZL7 423 aaKnown RBP5.75□□□□□ -1.49
VPS36-206ENST00000497149 MMRN2Q9H8L6 949 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 TESQ9UGI8 421 aaKnown RBP5.75□□□□□ -1.49
VPS36-206ENST00000497149 SERTAD3Q9UJW9 196 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 CDC23Q9UJX2 597 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 LRCH1Q9Y2L9 728 aa5.75□□□□□ -1.49
VPS36-206ENST00000497149 A0A087WZ62 844 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 PLA2G6O60733 806 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 RASAL1O95294 804 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 CSF1RP07333 972 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 MYL4P12829 197 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 PRKAG1P54619 331 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 CHAF1AQ13111 956 aaPredicted RBP5.74□□□□□ -1.49
VPS36-206ENST00000497149 STK3Q13188 491 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 PTPAQ15257 358 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 ZNF750Q32MQ0 723 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 CACHD1Q5VU97 1274 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 VWA1Q6PCB0 445 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 SLC15A3Q8IY34 581 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 SYTL1Q8IYJ3 562 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 FANCBQ8NB91 859 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 B3GALNT2Q8NCR0 500 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 CCDC150Q8NCX0 1101 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 SMCR8Q8TEV9 937 aaPredicted RBP5.74□□□□□ -1.49
VPS36-206ENST00000497149 LPIN2Q92539 896 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 PSMD1Q99460 953 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 ACTRT3Q9BYD9 372 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 ZNF341Q9BYN7 854 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 MAGEB5Q9BZ81 275 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 TRIM5Q9C035 493 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 FAM83DQ9H4H8 585 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 AS3MTQ9HBK9 375 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 GBA2Q9HCG7 927 aaPredicted RBP5.74□□□□□ -1.49
VPS36-206ENST00000497149 CASS4Q9NQ75 786 aa5.74□□□□□ -1.49
VPS36-206ENST00000497149 AQP7P3A6NL99 342 aa5.73□□□□□ -1.49
VPS36-206ENST00000497149 ADAMTS3O15072 1205 aa5.73□□□□□ -1.49
VPS36-206ENST00000497149 PPM1DO15297 605 aa5.73□□□□□ -1.49
VPS36-206ENST00000497149 PROM1O43490 865 aa5.73□□□□□ -1.49
VPS36-206ENST00000497149 KCNQ3O43525 872 aa5.73□□□□□ -1.49
VPS36-206ENST00000497149 RGS10O43665 173 aa5.73□□□□□ -1.49
VPS36-206ENST00000497149 NARSO43776 548 aaKnown RBP5.73□□□□□ -1.49
VPS36-206ENST00000497149 INSRRP14616 1297 aa5.73□□□□□ -1.49
VPS36-206ENST00000497149 ZEB1P37275 1124 aaPredicted RBP5.73□□□□□ -1.49
VPS36-206ENST00000497149 TECP42680 631 aa5.73□□□□□ -1.49
VPS36-206ENST00000497149 COPAP53621 1224 aa5.73□□□□□ -1.49
VPS36-206ENST00000497149 ITGA8P53708 1063 aa5.73□□□□□ -1.49
VPS36-206ENST00000497149 ITIH3Q06033 890 aa5.73□□□□□ -1.49
VPS36-206ENST00000497149 TSHZ1Q6ZSZ6 1077 aa5.73□□□□□ -1.49
VPS36-206ENST00000497149 SPARTQ8N0X7 666 aa5.73□□□□□ -1.49
VPS36-206ENST00000497149 TMEM41AQ96HV5 264 aa5.73□□□□□ -1.49
VPS36-206ENST00000497149 Q96MF0 132 aa5.73□□□□□ -1.49
VPS36-206ENST00000497149 HEYLQ9NQ87 328 aaPredicted RBP5.73□□□□□ -1.49
VPS36-206ENST00000497149 MYRFQ9Y2G1 1151 aa5.73□□□□□ -1.49
VPS36-206ENST00000497149 ARID4BQ4LE39 1312 aaPredicted RBP5.73□□□□□ -1.49
VPS36-206ENST00000497149 NPIPB8E9PQR5 432 aa5.72□□□□□ -1.49
VPS36-206ENST00000497149 F5H423 210 aaPredicted RBP5.72□□□□□ -1.49
VPS36-206ENST00000497149 HNRNPDLO14979 420 aaKnown RBP5.72□□□□□ -1.49
VPS36-206ENST00000497149 PIAS2O75928 621 aa5.72□□□□□ -1.49
VPS36-206ENST00000497149 NDST3O95803 873 aa5.72□□□□□ -1.49
VPS36-206ENST00000497149 MAKP20794 623 aa5.72□□□□□ -1.49
VPS36-206ENST00000497149 GABRB3P28472 473 aa5.72□□□□□ -1.49
VPS36-206ENST00000497149 NXPH1P58417 271 aa5.72□□□□□ -1.49
VPS36-206ENST00000497149 BLOC1S1P78537 153 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms