RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 RAD23BP54727 409 aa8.8□□□□□ -1
USP54-215ENST00000497106 SLC6A3Q01959 620 aa8.8□□□□□ -1
USP54-215ENST00000497106 MDH1BQ5I0G3 518 aa8.8□□□□□ -1
USP54-215ENST00000497106 PLEKHA7Q6IQ23 1121 aa8.8□□□□□ -1
USP54-215ENST00000497106 CNKSR3Q6P9H4 555 aa8.8□□□□□ -1
USP54-215ENST00000497106 SCN4BQ8IWT1 228 aa8.8□□□□□ -1
USP54-215ENST00000497106 B3GALNT2Q8NCR0 500 aa8.8□□□□□ -1
USP54-215ENST00000497106 KRT82Q9NSB4 513 aa8.8□□□□□ -1
USP54-215ENST00000497106 PCDHB5Q9Y5E4 795 aa8.8□□□□□ -1
USP54-215ENST00000497106 PCDHA3Q9Y5H8 950 aa8.8□□□□□ -1
USP54-215ENST00000497106 SMAPO00193 183 aa8.8□□□□□ -1
USP54-215ENST00000497106 O00370 1275 aa8.8□□□□□ -1
USP54-215ENST00000497106 XPO1O14980 1071 aaKnown RBP8.8□□□□□ -1
USP54-215ENST00000497106 PPM1AP35813 382 aa8.8□□□□□ -1
USP54-215ENST00000497106 SULT1E1P49888 294 aa8.8□□□□□ -1
USP54-215ENST00000497106 ZNF132P52740 706 aa8.8□□□□□ -1
USP54-215ENST00000497106 CDH8P55286 799 aa8.8□□□□□ -1
USP54-215ENST00000497106 PLD1Q13393 1074 aa8.8□□□□□ -1
USP54-215ENST00000497106 CTXN3Q4LDR2 81 aa8.8□□□□□ -1
USP54-215ENST00000497106 C4orf22Q6V702 233 aa8.8□□□□□ -1
USP54-215ENST00000497106 MON1BQ7L1V2 547 aa8.8□□□□□ -1
USP54-215ENST00000497106 PPP1R12CQ9BZL4 782 aa8.8□□□□□ -1
USP54-215ENST00000497106 TRPV6Q9H1D0 765 aa8.8□□□□□ -1
USP54-215ENST00000497106 PRG3Q9Y2Y8 225 aaPredicted RBP8.8□□□□□ -1
USP54-215ENST00000497106 DUSP10Q9Y6W6 482 aa8.8□□□□□ -1
USP54-215ENST00000497106 ABLIM1O14639 778 aa8.79□□□□□ -1
USP54-215ENST00000497106 ZNF263O14978 683 aa8.79□□□□□ -1
USP54-215ENST00000497106 SRGAP2O75044 1071 aa8.79□□□□□ -1
USP54-215ENST00000497106 SLC2A3P11169 496 aa8.79□□□□□ -1
USP54-215ENST00000497106 NPR3P17342 541 aa8.79□□□□□ -1
USP54-215ENST00000497106 ATP5DP30049 168 aa8.79□□□□□ -1
USP54-215ENST00000497106 CTNNA1P35221 906 aaKnown RBP8.79□□□□□ -1
USP54-215ENST00000497106 RGS7P49802 495 aa8.79□□□□□ -1
USP54-215ENST00000497106 CCDC14Q49A88 953 aa8.79□□□□□ -1
USP54-215ENST00000497106 PHLDB2Q86SQ0 1253 aa8.79□□□□□ -1
USP54-215ENST00000497106 CDKL3Q8IVW4 592 aaPredicted RBP8.79□□□□□ -1
USP54-215ENST00000497106 KRT222Q8N1A0 295 aa8.79□□□□□ -1
USP54-215ENST00000497106 CALN1Q9BXU9 219 aa8.79□□□□□ -1
USP54-215ENST00000497106 FBXO44Q9H4M3 255 aa8.79□□□□□ -1
USP54-215ENST00000497106 ZWILCHQ9H900 591 aa8.79□□□□□ -1
USP54-215ENST00000497106 PIRO00625 290 aa8.79□□□□□ -1
USP54-215ENST00000497106 RTN3O95197 1032 aaPredicted RBP8.79□□□□□ -1
USP54-215ENST00000497106 CHRNB2P17787 502 aa8.79□□□□□ -1
USP54-215ENST00000497106 CDH5P33151 784 aaPredicted RBP8.79□□□□□ -1
USP54-215ENST00000497106 ARPP19P56211 112 aa8.79□□□□□ -1
USP54-215ENST00000497106 PPIGQ13427 754 aaKnown RBP eCLIP8.79□□□□□ -1
USP54-215ENST00000497106 ANKS3Q6ZW76 656 aa8.79□□□□□ -1
USP54-215ENST00000497106 POLNQ7Z5Q5 900 aa8.79□□□□□ -1
USP54-215ENST00000497106 SLC4A11Q8NBS3 891 aa8.79□□□□□ -1
USP54-215ENST00000497106 HTATIP2Q9BUP3 242 aa8.79□□□□□ -1
USP54-215ENST00000497106 TLR10Q9BXR5 811 aa8.79□□□□□ -1
USP54-215ENST00000497106 AJAP1Q9UKB5 411 aaPredicted RBP8.79□□□□□ -1
USP54-215ENST00000497106 ATMINO43313 823 aaPredicted RBP8.79□□□□□ -1
USP54-215ENST00000497106 CLTBP09497 229 aa8.79□□□□□ -1
USP54-215ENST00000497106 UNGP13051 313 aaPredicted RBP8.79□□□□□ -1
USP54-215ENST00000497106 GUCY2DQ02846 1103 aa8.79□□□□□ -1
USP54-215ENST00000497106 PTP4A2Q12974 167 aa8.79□□□□□ -1
USP54-215ENST00000497106 MAMLD1Q13495 774 aa8.79□□□□□ -1
USP54-215ENST00000497106 SLMAPQ14BN4 828 aa8.79□□□□□ -1
USP54-215ENST00000497106 WSCD1Q658N2 575 aa8.79□□□□□ -1
USP54-215ENST00000497106 DENND1BQ6P3S1 775 aa8.79□□□□□ -1
USP54-215ENST00000497106 CRYBG2Q8N1P7 616 aa8.79□□□□□ -1
USP54-215ENST00000497106 ARHGEF26Q96DR7 871 aa8.79□□□□□ -1
USP54-215ENST00000497106 TOX2Q96NM4 488 aa8.79□□□□□ -1
USP54-215ENST00000497106 PCDHB18PQ96TA0 734 aa8.79□□□□□ -1
USP54-215ENST00000497106 DDX50Q9BQ39 737 aaKnown RBP8.79□□□□□ -1
USP54-215ENST00000497106 ACBD6Q9BR61 282 aa8.79□□□□□ -1
USP54-215ENST00000497106 FOXP3Q9BZS1 431 aa8.79□□□□□ -1
USP54-215ENST00000497106 OSGEPQ9NPF4 335 aa8.79□□□□□ -1
USP54-215ENST00000497106 SIX4Q9UIU6 781 aa8.79□□□□□ -1
USP54-215ENST00000497106 ABHD14A-ACY1A0A1B0GW23 586 aa8.78□□□□□ -1
USP54-215ENST00000497106 TYW5A2RUC4 315 aaKnown RBP8.78□□□□□ -1
USP54-215ENST00000497106 APOEP02649 317 aa8.78□□□□□ -1
USP54-215ENST00000497106 HOXC8P31273 242 aa8.78□□□□□ -1
USP54-215ENST00000497106 ADCY8P40145 1251 aa8.78□□□□□ -1
USP54-215ENST00000497106 LILRA4P59901 499 aa8.78□□□□□ -1
USP54-215ENST00000497106 NNTQ13423 1086 aa8.78□□□□□ -1
USP54-215ENST00000497106 PTPROQ16827 1216 aa8.78□□□□□ -1
USP54-215ENST00000497106 KAZNQ674X7 775 aa8.78□□□□□ -1
USP54-215ENST00000497106 SLC13A5Q86YT5 568 aaPredicted RBP8.78□□□□□ -1
USP54-215ENST00000497106 KATNAL2Q8IYT4 538 aa8.78□□□□□ -1
USP54-215ENST00000497106 C2orf15Q8WU43 125 aaKnown RBP8.78□□□□□ -1
USP54-215ENST00000497106 HSPH1Q92598 858 aa8.78□□□□□ -1
USP54-215ENST00000497106 LPPQ93052 612 aa8.78□□□□□ -1
USP54-215ENST00000497106 HNRNPABQ99729 332 aaKnown RBP8.78□□□□□ -1
USP54-215ENST00000497106 EPAS1Q99814 870 aa8.78□□□□□ -1
USP54-215ENST00000497106 XYLT2Q9H1B5 865 aa8.78□□□□□ -1
USP54-215ENST00000497106 TTC7AQ9ULT0 858 aaPredicted RBP8.78□□□□□ -1
USP54-215ENST00000497106 PCDHB12Q9Y5F1 795 aa8.78□□□□□ -1
USP54-215ENST00000497106 KIAA1217Q5T5P2 1943 aa8.78□□□□□ -1
USP54-215ENST00000497106 E7EVH7 732 aa8.78□□□□□ -1
USP54-215ENST00000497106 CHRNA1P02708 482 aa8.78□□□□□ -1
USP54-215ENST00000497106 URODP06132 367 aa8.78□□□□□ -1
USP54-215ENST00000497106 LAG3P18627 525 aa8.78□□□□□ -1
USP54-215ENST00000497106 SERPINB6P35237 376 aa8.78□□□□□ -1
USP54-215ENST00000497106 ACBD5Q5T8D3 534 aaPredicted RBP8.78□□□□□ -1
USP54-215ENST00000497106 CYP4A22Q5TCH4 519 aa8.78□□□□□ -1
USP54-215ENST00000497106 TMEM192Q8IY95 271 aa8.78□□□□□ -1
USP54-215ENST00000497106 ATL2Q8NHH9 583 aa8.78□□□□□ -1
USP54-215ENST00000497106 GABPB2Q8TAK5 448 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms