RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 SCN10AQ9Y5Y9 1956 aa7.18□□□□□ -1.26
TRA2B-216ENST00000493864 RANBP2P49792 3224 aaKnown RBP7.17□□□□□ -1.26
TRA2B-216ENST00000493864 SMIM35A0A1B0GVV1 85 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 A0A1W2PQ45 241 aaPredicted RBP7.17□□□□□ -1.26
TRA2B-216ENST00000493864 A0A1W2PQY0 241 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 MBLAC1A4D2B0 266 aaPredicted RBP7.17□□□□□ -1.26
TRA2B-216ENST00000493864 KBTBD13C9JR72 458 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 AURKAO14965 403 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 CABYRO75952 493 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 GCNT3O95395 438 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 SGPL1O95470 568 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 VTNP04004 478 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 GNAT1P11488 350 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 CYP2C9P11712 490 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 HOXC8P31273 242 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 HK2P52789 917 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 RTP1P59025 263 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 ITGA7Q13683 1181 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 L1TD1Q5T7N2 865 aaKnown RBP7.17□□□□□ -1.26
TRA2B-216ENST00000493864 HAUS6Q7Z4H7 955 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 RHPN2Q8IUC4 686 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 NELFCDQ8IXH7 590 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 MYOCDQ8IZQ8 938 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 GUF1Q8N442 669 aaKnown RBP7.17□□□□□ -1.26
TRA2B-216ENST00000493864 TMEM161BQ8NDZ6 487 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 U2AF1L4Q8WU68 220 aaKnown RBP7.17□□□□□ -1.26
TRA2B-216ENST00000493864 SCFD1Q8WVM8 642 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 TCP11Q8WWU5 503 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 NELFBQ8WX92 580 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 PSPC1Q8WXF1 523 aaKnown RBP7.17□□□□□ -1.26
TRA2B-216ENST00000493864 ZNF669Q96BR6 464 aaPredicted RBP7.17□□□□□ -1.26
TRA2B-216ENST00000493864 SGSM3Q96HU1 749 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 GLT1D1Q96MS3 346 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 KIFC3Q9BVG8 833 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 SPATA9Q9BWV2 254 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 STRA6Q9BX79 667 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 GTPBP4Q9BZE4 634 aaKnown RBP7.17□□□□□ -1.26
TRA2B-216ENST00000493864 FAM49AQ9H0Q0 323 aaPredicted RBP7.17□□□□□ -1.26
TRA2B-216ENST00000493864 KMT5AQ9NQR1 393 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 OAS3Q9Y6K5 1087 aaKnown RBP7.17□□□□□ -1.26
TRA2B-216ENST00000493864 ADGRA3Q8IWK6 1321 aa7.17□□□□□ -1.26
TRA2B-216ENST00000493864 DENND3A2RUS2 1198 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 LRRIQ4A6NIV6 560 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 K7ENM7 598 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 DNM1LO00429 736 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 ASAP2O43150 1006 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 ZGLP1P0C6A0 271 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 ENDOUP21128 410 aaKnown RBP7.16□□□□□ -1.26
TRA2B-216ENST00000493864 CCNE1P24864 410 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 TMOD1P28289 359 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 GRIA2P42262 883 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 NAMPTP43490 491 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 CDK7P50613 346 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 NCKAP1LP55160 1127 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 NLRP11P59045 1033 aaKnown RBP7.16□□□□□ -1.26
TRA2B-216ENST00000493864 GTF2BQ00403 316 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 TMEM62Q0P6H9 643 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 DMP1Q13316 513 aaPredicted RBP7.16□□□□□ -1.26
TRA2B-216ENST00000493864 STIM1Q13586 685 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 CAPSQ13938 189 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 HSP90AA2PQ14568 343 aaPredicted RBP7.16□□□□□ -1.26
TRA2B-216ENST00000493864 MXD4Q14582 209 aaPredicted RBP7.16□□□□□ -1.26
TRA2B-216ENST00000493864 PPP2R5AQ15172 486 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 COBLL1Q53SF7 1204 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 CT47A1Q5JQC4 288 aaPredicted RBP7.16□□□□□ -1.26
TRA2B-216ENST00000493864 ANKRD40Q6AI12 368 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 CENPPQ6IPU0 288 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 LUZP1Q86V48 1076 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 SESTD1Q86VW0 696 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 DHX40Q8IX18 779 aaKnown RBP7.16□□□□□ -1.26
TRA2B-216ENST00000493864 AOPEPQ8N6M6 819 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 NAT16Q8N8M0 369 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 RNF149Q8NC42 400 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 DEPTORQ8TB45 409 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 DIS3LQ8TF46 1054 aaKnown RBP7.16□□□□□ -1.26
TRA2B-216ENST00000493864 DNAJB3Q8WWF6 145 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 P2RX5Q93086 422 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 DHTKD1Q96HY7 919 aaPredicted RBP7.16□□□□□ -1.26
TRA2B-216ENST00000493864 CTAGE1Q96RT6 745 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 PPP1R16BQ96T49 567 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 BPIFA3Q9BQP9 254 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 SENP6Q9GZR1 1112 aaPredicted RBP7.16□□□□□ -1.26
TRA2B-216ENST00000493864 NAT10Q9H0A0 1025 aaKnown RBP7.16□□□□□ -1.26
TRA2B-216ENST00000493864 TRPV6Q9H1D0 765 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 NKX2-4Q9H2Z4 354 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 KCTD10Q9H3F6 313 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 ST6GALNAC4Q9H4F1 302 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 C17orf75Q9HAS0 396 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 RC3H2Q9HBD1 1191 aaKnown RBP7.16□□□□□ -1.26
TRA2B-216ENST00000493864 RWDD2AQ9UIY3 292 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 TBX20Q9UMR3 447 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 CTNND2Q9UQB3 1225 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 BACE2Q9Y5Z0 518 aa7.16□□□□□ -1.26
TRA2B-216ENST00000493864 A0A087WZ62 844 aa7.15□□□□□ -1.26
TRA2B-216ENST00000493864 A0A0U1RQG5 324 aaPredicted RBP7.15□□□□□ -1.26
TRA2B-216ENST00000493864 FSD2A1L4K1 749 aa7.15□□□□□ -1.26
TRA2B-216ENST00000493864 TRIM49BA6NDI0 452 aa7.15□□□□□ -1.26
TRA2B-216ENST00000493864 C2orf71A6NGG8 1288 aa7.15□□□□□ -1.26
TRA2B-216ENST00000493864 ANKRD63C9JTQ0 380 aa7.15□□□□□ -1.26
TRA2B-216ENST00000493864 K7ERI5 159 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms