RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 MAGED2Q9UNF1 606 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 CACNA1IQ9P0X4 2223 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 ANHXE9PGG2 379 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 GNA14O95837 355 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 FAM163BP0C2L3 166 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 CCDC192P0DO97 292 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 LAMP2P13473 410 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 CEBPBP17676 345 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 PTPN1P18031 435 aaKnown RBP11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 CD58P19256 250 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 TGM1P22735 817 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 ANXA13P27216 316 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 GRIK1P39086 918 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 NLRP12P59046 1061 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 LRMPQ12912 555 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 DPCR1Q3MIW9 517 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 CBWD6Q4V339 395 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 CBWD3Q5JTY5 395 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 CBWD5Q5RIA9 395 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 SASS6Q6UVJ0 657 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 LIMS2Q7Z4I7 341 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 DNAJB7Q7Z6W7 309 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 ACOT1Q86TX2 421 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 NPAS3Q8IXF0 933 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 LEMD2Q8NC56 503 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 B3GALNT2Q8NCR0 500 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 STKLD1Q8NE28 680 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 SLC35C1Q96A29 364 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 TCEAL4Q96EI5 215 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 TNIP3Q96KP6 325 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 GCNAQ96QF7 691 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 SDCBP2Q9H190 292 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 DNAJC25Q9H1X3 360 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 CRTAC1Q9NQ79 661 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 RAB20Q9NX57 234 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 HSFX1Q9UBD0 423 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 CA14Q9ULX7 337 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 SIT1Q9Y3P8 196 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 ASB3Q9Y575 518 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 ZFP37Q9Y6Q3 630 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 DOCK6Q96HP0 2047 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 ATP8B3O60423 1300 aa11.09□□□□□ -0.63
TRAPPC12-222ENST00000493792 A0A1W2PRU2 124 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 CLDN5O00501 218 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 LRRN2O75325 713 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 SRFP11831 508 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 ATF6P18850 670 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 BDNFP23560 247 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 GABRR2P28476 465 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 CCR2P41597 374 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 ASPAP45381 313 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 FMO5P49326 533 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 NDST1P52848 882 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 CETN1Q12798 172 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 FAM171BQ6P995 826 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 MYCBPAPQ8TBZ2 947 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 SEMA4DQ92854 862 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 PSMG2Q969U7 264 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 PCED1BQ96HM7 432 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 FUBP3Q96I24 572 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 PKMYT1Q99640 499 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 DNAI2Q9GZS0 605 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 ATXN3LQ9H3M9 355 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 APOBEC3GQ9HC16 384 aaKnown RBP11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 ABCB6Q9NP58 842 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 NME7Q9Y5B8 376 aa11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRAPPC12-222ENST00000493792 FGF19O95750 216 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 CSH1P0DML2 217 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 CSH2P0DML3 217 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 MTIF2P46199 727 aaKnown RBP11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 STARD6P59095 220 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 KCNH2Q12809 1159 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 IFRD2Q12894 506 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 HTR4Q13639 388 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 TEAD2Q15562 447 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 CFAP221Q4G0U5 840 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 ZNF394Q53GI3 561 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 ARHGAP15Q53QZ3 475 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 HSP90AA4PQ58FG1 418 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 PRSS36Q5K4E3 855 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 CCDC183Q5T5S1 534 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 FOXR2Q6PJQ5 311 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 ZC3H14Q6PJT7 736 aaKnown RBP11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 PARM1Q6UWI2 310 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 MTSS1LQ765P7 747 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 SHKBP1Q8TBC3 707 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 TATDN2Q93075 761 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 CNOT6LQ96LI5 555 aaKnown RBP11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 HINFPQ9BQA5 517 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 KXD1Q9BQD3 176 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 RPP25Q9BUL9 199 aaKnown RBP11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 ELOVL4Q9GZR5 314 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 CYP3A43Q9HB55 503 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 ZNF334Q9HCZ1 680 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 AVENQ9NQS1 362 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 FAM49BQ9NUQ9 324 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 HMGXB4Q9UGU5 601 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 NUMBLQ9Y6R0 609 aa11.07□□□□□ -0.64
TRAPPC12-222ENST00000493792 SLC38A8A6NNN8 435 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms