RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 PRPF6O94906 941 aaKnown RBP18.62■□□□□ 0.57
COL9A1-210ENST00000493682 TMEM191BP0C7N4 346 aa18.62■□□□□ 0.57
COL9A1-210ENST00000493682 PLA2G2CQ5R387 149 aa18.62■□□□□ 0.57
COL9A1-210ENST00000493682 LMBRD2Q68DH5 695 aaPredicted RBP18.62■□□□□ 0.57
COL9A1-210ENST00000493682 IL31Q6EBC2 164 aa18.62■□□□□ 0.57
COL9A1-210ENST00000493682 FAM171BQ6P995 826 aa18.62■□□□□ 0.57
COL9A1-210ENST00000493682 LIMS2Q7Z4I7 341 aa18.62■□□□□ 0.57
COL9A1-210ENST00000493682 ARL14EPQ8N8R7 260 aaPredicted RBP18.62■□□□□ 0.57
COL9A1-210ENST00000493682 RPLP0P6Q8NHW5 317 aa18.62■□□□□ 0.57
COL9A1-210ENST00000493682 EZH1Q92800 747 aaPredicted RBP18.62■□□□□ 0.57
COL9A1-210ENST00000493682 EXOC4Q96A65 974 aa18.62■□□□□ 0.57
COL9A1-210ENST00000493682 INTS13Q9NVM9 706 aa18.62■□□□□ 0.57
COL9A1-210ENST00000493682 TPRP12270 2363 aaKnown RBP18.62■□□□□ 0.57
COL9A1-210ENST00000493682 ACACBO00763 2458 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 GREB1Q4ZG55 1949 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 PTPRJQ12913 1337 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 C2orf78A6NCI8 922 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 LMO2P25791 158 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 MAGEA11P43364 429 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 IFNAR2P48551 515 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 MYO1EQ12965 1108 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 EML3Q32P44 896 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 SYT13Q7L8C5 426 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 GPD1LQ8N335 351 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 FSIP1Q8NA03 581 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 OR5B17Q8NGF7 314 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 SH3RF2Q8TEC5 729 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 KBTBD7Q8WVZ9 684 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 CD101Q93033 1021 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 HPDLQ96IR7 371 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 ANKRD36BP1Q96IX9 119 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 PCDHGA5Q9Y5G8 931 aa18.61■□□□□ 0.57
COL9A1-210ENST00000493682 KMT2BQ9UMN6 2715 aaPredicted RBP18.61■□□□□ 0.57
COL9A1-210ENST00000493682 TM4SF5O14894 197 aa18.6■□□□□ 0.57
COL9A1-210ENST00000493682 KIAA0391O15091 583 aaKnown RBP18.6■□□□□ 0.57
COL9A1-210ENST00000493682 HDCP19113 662 aa18.6■□□□□ 0.57
COL9A1-210ENST00000493682 SYT1P21579 422 aa18.6■□□□□ 0.57
COL9A1-210ENST00000493682 PSMC1P62191 440 aaKnown RBP18.6■□□□□ 0.57
COL9A1-210ENST00000493682 KCNB1Q14721 858 aa18.6■□□□□ 0.57
COL9A1-210ENST00000493682 PLK5Q496M5 336 aa18.6■□□□□ 0.57
COL9A1-210ENST00000493682 C4orf50Q6ZRC1 276 aa18.6■□□□□ 0.57
COL9A1-210ENST00000493682 DPH6Q7L8W6 267 aa18.6■□□□□ 0.57
COL9A1-210ENST00000493682 SYT15Q9BQS2 421 aa18.6■□□□□ 0.57
COL9A1-210ENST00000493682 LINC00597Q9H2U6 94 aa18.6■□□□□ 0.57
COL9A1-210ENST00000493682 SMOC1Q9H4F8 434 aa18.6■□□□□ 0.57
COL9A1-210ENST00000493682 CRTAC1Q9NQ79 661 aa18.6■□□□□ 0.57
COL9A1-210ENST00000493682 MAGEC2Q9UBF1 373 aaPredicted RBP18.6■□□□□ 0.57
COL9A1-210ENST00000493682 CDH9Q9ULB4 789 aa18.6■□□□□ 0.57
COL9A1-210ENST00000493682 R3HCC1Q9Y3T6 440 aaKnown RBP18.6■□□□□ 0.57
COL9A1-210ENST00000493682 MORC2Q9Y6X9 1032 aaPredicted RBP18.6■□□□□ 0.57
COL9A1-210ENST00000493682 ATG2BQ96BY7 2078 aa18.6■□□□□ 0.57
COL9A1-210ENST00000493682 CACNA1BQ00975 2339 aa18.6■□□□□ 0.57
COL9A1-210ENST00000493682 ZNF233A6NK53 670 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 APBB3O95704 486 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 TNNC2P02585 160 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 TCF3P15923 654 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 MPLP40238 635 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 DMC1Q14565 340 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 SLC39A14Q15043 492 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 DUOXA2Q1HG44 320 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 STPG1Q5TH74 334 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 CBWD2Q8IUF1 395 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 CCDC65Q8IXS2 484 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 GLIS3Q8NEA6 775 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 MYLPFQ96A32 169 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 ACDQ96AP0 544 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 SPATA17Q96L03 361 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 USP28Q96RU2 1077 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 DUSP15Q9H1R2 295 aaPredicted RBP18.59■□□□□ 0.57
COL9A1-210ENST00000493682 ARHGAP26Q9UNA1 814 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 SDK1Q7Z5N4 2213 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 EML5Q05BV3 1969 aa18.59■□□□□ 0.57
COL9A1-210ENST00000493682 DCLK1O15075 740 aa18.58■□□□□ 0.56
COL9A1-210ENST00000493682 PDGFRBP09619 1106 aa18.58■□□□□ 0.56
COL9A1-210ENST00000493682 BDNFP23560 247 aa18.58■□□□□ 0.56
COL9A1-210ENST00000493682 NR1H3Q13133 447 aa18.58■□□□□ 0.56
COL9A1-210ENST00000493682 PSMD2Q13200 908 aa18.58■□□□□ 0.56
COL9A1-210ENST00000493682 VSTM1Q6UX27 236 aa18.58■□□□□ 0.56
COL9A1-210ENST00000493682 PDILTQ8N807 584 aa18.58■□□□□ 0.56
COL9A1-210ENST00000493682 HPS3Q969F9 1004 aa18.58■□□□□ 0.56
COL9A1-210ENST00000493682 CEP295NLQ96MC4 621 aa18.58■□□□□ 0.56
COL9A1-210ENST00000493682 VPS45Q9NRW7 570 aa18.58■□□□□ 0.56
COL9A1-210ENST00000493682 EBF1Q9UH73 591 aa18.58■□□□□ 0.56
COL9A1-210ENST00000493682 SPAG17Q6Q759 2223 aa18.58■□□□□ 0.56
COL9A1-210ENST00000493682 ANAPC1Q9H1A4 1944 aa18.57■□□□□ 0.56
COL9A1-210ENST00000493682 WARSP23381 471 aaKnown RBP18.57■□□□□ 0.56
COL9A1-210ENST00000493682 HOXD13P35453 343 aa18.57■□□□□ 0.56
COL9A1-210ENST00000493682 GRIK1P39086 918 aa18.57■□□□□ 0.56
COL9A1-210ENST00000493682 PDE6CP51160 858 aa18.57■□□□□ 0.56
COL9A1-210ENST00000493682 USP46P62068 366 aa18.57■□□□□ 0.56
COL9A1-210ENST00000493682 ZXDBP98169 803 aa18.57■□□□□ 0.56
COL9A1-210ENST00000493682 CYP27A1Q02318 531 aa18.57■□□□□ 0.56
COL9A1-210ENST00000493682 SURF1Q15526 300 aa18.57■□□□□ 0.56
COL9A1-210ENST00000493682 MAPRE1Q15691 268 aaKnown RBP18.57■□□□□ 0.56
COL9A1-210ENST00000493682 ELF2Q15723 593 aa18.57■□□□□ 0.56
COL9A1-210ENST00000493682 ST3GAL2Q16842 350 aa18.57■□□□□ 0.56
COL9A1-210ENST00000493682 N4BP2L1Q5TBK1 243 aaPredicted RBP18.57■□□□□ 0.56
COL9A1-210ENST00000493682 STXBP4Q6ZWJ1 553 aa18.57■□□□□ 0.56
COL9A1-210ENST00000493682 HSPBP1Q9NZL4 362 aa18.57■□□□□ 0.56
COL9A1-210ENST00000493682 RHOBTB1O94844 696 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms