RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 M0QYV0 167 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 CLDN5O00501 218 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 PER2O15055 1255 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 MICAL2O94851 1124 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 HNRNPA1P09651 372 aaKnown RBP eCLIP12.23□□□□□ -0.45
LSM2-214ENST00000493387 NPR3P17342 541 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 TNFAIP3P21580 790 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 CYP2F1P24903 491 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 HOXA9P31269 272 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 GRIK1P39086 918 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 ALDH1A3P47895 512 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 SNX16P57768 344 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 ADGRE1Q14246 886 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 MGAT5BQ3V5L5 792 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 TDRD12Q587J7 1177 aaKnown RBP12.23□□□□□ -0.45
LSM2-214ENST00000493387 TMEM184AQ6ZMB5 413 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 PAQR9Q6ZVX9 377 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 NOP9Q86U38 636 aaKnown RBP12.23□□□□□ -0.45
LSM2-214ENST00000493387 DEFB123Q8N688 67 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 TC2NQ8N9U0 490 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 TMEM35BQ8NCS4 154 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 DDX1Q92499 740 aaKnown RBP12.23□□□□□ -0.45
LSM2-214ENST00000493387 SPATA17Q96L03 361 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 FAM161BQ96MY7 647 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 NOX5Q96PH1 765 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 SEPT5Q99719 369 aaPredicted RBP12.23□□□□□ -0.45
LSM2-214ENST00000493387 AGPAT1Q99943 283 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 LPIN3Q9BQK8 851 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 HAUS4Q9H6D7 363 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 CSNK1G1Q9HCP0 422 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 PNPLA8Q9NP80 782 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 EHD2Q9NZN4 543 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 NOCTQ9UK39 431 aaKnown RBP12.23□□□□□ -0.45
LSM2-214ENST00000493387 ASB3Q9Y575 518 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 HCFC2Q9Y5Z7 792 aa12.23□□□□□ -0.45
LSM2-214ENST00000493387 SSU72P8A0A1W2PR75 194 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 SPDYE4A6NLX3 237 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 XPO1O14980 1071 aaKnown RBP12.22□□□□□ -0.45
LSM2-214ENST00000493387 NRDCO43847 1150 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 ZMYND10O75800 440 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 SEC24AO95486 1093 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 VNN2O95498 520 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 LRG1P02750 347 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 C8AP07357 584 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 POU2F2P09086 479 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 ACADSBP45954 432 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 EPHB3P54753 998 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 HYAL1Q12794 435 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 VEPH1Q14D04 833 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 PKDCCQ504Y2 493 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 PPM1LQ5SGD2 360 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 TAF3Q5VWG9 929 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 CYP26C1Q6V0L0 522 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 ITIH5Q86UX2 942 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 SCN4BQ8IWT1 228 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 ELMOD1Q8N336 334 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 MSANTD4Q8NCY6 345 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 STK32AQ8WU08 396 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 HSFY1Q96LI6 401 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 CDX2Q99626 313 aaPredicted RBP12.22□□□□□ -0.45
LSM2-214ENST00000493387 ZSWIM1Q9BR11 485 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 MIS12Q9H081 205 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 ACP6Q9NPH0 428 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 CYLDQ9NQC7 956 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 MAN1C1Q9NR34 630 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 COMMD8Q9NX08 183 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 ZDHHC7Q9NXF8 308 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 SLC27A5Q9Y2P5 690 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 INSL5Q9Y5Q6 135 aa12.22□□□□□ -0.45
LSM2-214ENST00000493387 F8VP50 259 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 XYLBO75191 536 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 CALCAP01258 141 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 MMEP08473 750 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 SPATA31D3P0C874 917 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 CSH1P0DML2 217 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 CSH2P0DML3 217 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 SKILP12757 684 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 EPCAMP16422 314 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 HOXB8P17481 243 aaPredicted RBP12.21□□□□□ -0.45
LSM2-214ENST00000493387 CHRNB2P17787 502 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 FECHP22830 423 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 CDH5P33151 784 aaPredicted RBP12.21□□□□□ -0.45
LSM2-214ENST00000493387 PLA2G4AP47712 749 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 MAP3K7CLP57077 242 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 FMO1Q01740 532 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 PDE4CQ08493 712 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 CCDC173Q0VFZ6 552 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 KCNC3Q14003 757 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 CCDC142Q17RM4 750 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 E4F1Q66K89 784 aaPredicted RBP12.21□□□□□ -0.45
LSM2-214ENST00000493387 HGSNATQ68CP4 663 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 DENND1BQ6P3S1 775 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 WDR59Q6PJI9 974 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 CLEC20AQ6ZU45 233 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 SPATA31D4Q6ZUB0 917 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 ZNF571Q7Z3V5 609 aaPredicted RBP12.21□□□□□ -0.45
LSM2-214ENST00000493387 TTC30AQ86WT1 665 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 TMTC1Q8IUR5 882 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 CMASQ8NFW8 434 aaPredicted RBP12.21□□□□□ -0.45
LSM2-214ENST00000493387 SLC7A14Q8TBB6 771 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms