RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 HAUS1Q96CS2 278 aa22.19■■□□□ 1.14
CCDC88B-208ENST00000492980 TRIM6Q9C030 488 aaPredicted RBP22.19■■□□□ 1.14
CCDC88B-208ENST00000492980 GJD2Q9UKL4 321 aa22.19■■□□□ 1.14
CCDC88B-208ENST00000492980 ZNF148Q9UQR1 794 aa22.19■■□□□ 1.14
CCDC88B-208ENST00000492980 EFR3BQ9Y2G0 817 aa22.19■■□□□ 1.14
CCDC88B-208ENST00000492980 HIBCHQ6NVY1 386 aaPredicted RBP22.19■■□□□ 1.14
CCDC88B-208ENST00000492980 CCHCR1Q8TD31 782 aa22.19■■□□□ 1.14
CCDC88B-208ENST00000492980 PWWP2AQ96N64 755 aa22.19■■□□□ 1.14
CCDC88B-208ENST00000492980 EPN3Q9H201 632 aa22.19■■□□□ 1.14
CCDC88B-208ENST00000492980 RSPH14Q9UHP6 348 aa22.19■■□□□ 1.14
CCDC88B-208ENST00000492980 SMIM23A6NLE4 172 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 E5RJQ4 531 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 KDELR1P24390 212 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 AKAP5P24588 427 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 MIPP30301 263 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 P3H1Q32P28 736 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 PPP1R26Q5T8A7 1209 aaPredicted RBP22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 C9orf57Q5W0N0 161 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 FAM183BPQ6ZVS7 135 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 APOL6Q9BWW8 343 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 AP5M1Q9H0R1 490 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 DNAJC17Q9NVM6 304 aaKnown RBP22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 PIN4Q9Y237 131 aaKnown RBP22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 PIK3R2O00459 728 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 RGS16O15492 202 aaPredicted RBP22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 ACSL3O95573 720 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 ZNF143P52747 638 aaPredicted RBP22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 PKDCCQ504Y2 493 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 TRNP1Q6NT89 227 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 ACOT1Q86TX2 421 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 SLC35B2Q8TB61 432 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 RNF19AQ9NV58 838 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 PCSK1NQ9UHG2 260 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 Q9Y3F1 56 aa22.18■■□□□ 1.14
CCDC88B-208ENST00000492980 SRRM3A6NNA2 597 aaPredicted RBP22.17■■□□□ 1.14
CCDC88B-208ENST00000492980 RNF8O76064 485 aa22.17■■□□□ 1.14
CCDC88B-208ENST00000492980 TTC4O95801 387 aa22.17■■□□□ 1.14
CCDC88B-208ENST00000492980 TRUB2O95900 331 aaKnown RBP22.17■■□□□ 1.14
CCDC88B-208ENST00000492980 IGHA2P01877 340 aa22.17■■□□□ 1.14
CCDC88B-208ENST00000492980 ITGAVP06756 1048 aa22.17■■□□□ 1.14
CCDC88B-208ENST00000492980 ZSCAN5DPP0CG00 497 aa22.17■■□□□ 1.14
CCDC88B-208ENST00000492980 GPD1P21695 349 aa22.17■■□□□ 1.14
CCDC88B-208ENST00000492980 RGS2P41220 211 aa22.17■■□□□ 1.14
CCDC88B-208ENST00000492980 OR6B2Q6IFH4 312 aa22.17■■□□□ 1.14
CCDC88B-208ENST00000492980 PIWIL1Q96J94 861 aaKnown RBP22.17■■□□□ 1.14
CCDC88B-208ENST00000492980 MIS12Q9H081 205 aa22.17■■□□□ 1.14
CCDC88B-208ENST00000492980 ADAM7Q9H2U9 754 aa22.17■■□□□ 1.14
CCDC88B-208ENST00000492980 ASNSD1Q9NWL6 643 aa22.17■■□□□ 1.14
CCDC88B-208ENST00000492980 UBQLN1Q9UMX0 589 aaKnown RBP22.17■■□□□ 1.14
CCDC88B-208ENST00000492980 C2CD4BA6NLJ0 364 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 RASGRF2O14827 1237 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 AGTP01019 485 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 CD48P09326 243 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 ETS1P14921 441 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 CCT5P48643 541 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 ARSEP51690 589 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 UBXN11Q5T124 520 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 BBS12Q6ZW61 710 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 TTC30AQ86WT1 665 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 CMASQ8NFW8 434 aaPredicted RBP22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 ROPN1BQ9BZX4 212 aaPredicted RBP22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 ROPN1Q9HAT0 212 aaPredicted RBP22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 NINJ2Q9NZG7 142 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 USP18Q9UMW8 372 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 TULP2O00295 520 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 DNALI1O14645 258 aaPredicted RBP22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 PCK1P35558 622 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 PSMC4P43686 418 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 SLCO1A2P46721 670 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 RGS7P49802 495 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 DYNLT1P63172 113 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 IFI35P80217 286 aaPredicted RBP22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 PPARDQ03181 441 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 AUHQ13825 339 aaKnown RBP22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 TAF5Q15542 800 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 TNFAIP8L3Q5GJ75 292 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 MFSD5Q6N075 450 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 RELL1Q8IUW5 271 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 RXFP2Q8WXD0 754 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 PEBP4Q96S96 227 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 APBA2Q99767 749 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 CNPY3Q9BT09 278 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 CNOT10Q9H9A5 744 aaKnown RBP22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 FAM49BQ9NUQ9 324 aa22.16■■□□□ 1.14
CCDC88B-208ENST00000492980 C17orf102A2RUQ5 167 aa22.15■■□□□ 1.14
CCDC88B-208ENST00000492980 CST8O60676 142 aa22.15■■□□□ 1.14
CCDC88B-208ENST00000492980 KYNUQ16719 465 aa22.15■■□□□ 1.14
CCDC88B-208ENST00000492980 SOWAHAQ2M3V2 549 aa22.15■■□□□ 1.14
CCDC88B-208ENST00000492980 PMF1Q6P1K2 205 aa22.15■■□□□ 1.14
CCDC88B-208ENST00000492980 ZCCHC9Q8N567 271 aaKnown RBP22.15■■□□□ 1.14
CCDC88B-208ENST00000492980 KATNAL1Q9BW62 490 aa22.15■■□□□ 1.14
CCDC88B-208ENST00000492980 KLK14Q9P0G3 267 aa22.15■■□□□ 1.14
CCDC88B-208ENST00000492980 SMIM28A0A1B0GU29 152 aa22.15■■□□□ 1.14
CCDC88B-208ENST00000492980 PIRO00625 290 aa22.15■■□□□ 1.14
CCDC88B-208ENST00000492980 NDUFAB1O14561 156 aa22.15■■□□□ 1.14
CCDC88B-208ENST00000492980 SETSIPP0DME0 302 aa22.15■■□□□ 1.14
CCDC88B-208ENST00000492980 HOXC8P31273 242 aa22.15■■□□□ 1.14
CCDC88B-208ENST00000492980 OTUD4Q01804 1114 aaKnown RBP22.15■■□□□ 1.14
CCDC88B-208ENST00000492980 SH3PXD2AQ5TCZ1 1133 aa22.15■■□□□ 1.14
CCDC88B-208ENST00000492980 UNC93AQ86WB7 457 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms