RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 DCLK2Q8N568 766 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 TTC8Q8TAM2 541 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 OSCP1Q8WVF1 389 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 KBTBD7Q8WVZ9 684 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 FOXD4L4Q8WXT5 416 aaPredicted RBP13.31□□□□□ -0.28
COL6A1-205ENST00000492851 SMG9Q9H0W8 520 aaKnown RBP13.31□□□□□ -0.28
COL6A1-205ENST00000492851 SLC39A2Q9NP94 309 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 TRPM5Q9NZQ8 1165 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 CFAP54Q96N23 3096 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 COL4A3Q01955 1670 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 TSC2P49815 1807 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 RIF1Q5UIP0 2472 aaKnown RBP13.3□□□□□ -0.28
COL6A1-205ENST00000492851 ANK1P16157 1881 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 VPS13AQ96RL7 3174 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 CLIC2O15247 247 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 RETP07949 1114 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 PDGFRBP09619 1106 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 TCF3P15923 654 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 HDCP19113 662 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 AFMP43652 599 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 GPR15P49685 360 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 NOP14P78316 857 aaKnown RBP13.3□□□□□ -0.28
COL6A1-205ENST00000492851 SIM2Q14190 667 aaPredicted RBP13.3□□□□□ -0.28
COL6A1-205ENST00000492851 MTF1Q14872 753 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 FOXD4L6Q3SYB3 417 aaPredicted RBP13.3□□□□□ -0.28
COL6A1-205ENST00000492851 TMEM196Q5HYL7 178 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 SDHAF4Q5VUM1 108 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 FOXD4L3Q6VB84 417 aaPredicted RBP13.3□□□□□ -0.28
COL6A1-205ENST00000492851 DGLUCYQ7Z3D6 616 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 OR6B3Q8NGW1 331 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 ATP2A3Q93084 1043 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 MYLPFQ96A32 169 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 CCDC47Q96A33 483 aaKnown RBP13.3□□□□□ -0.28
COL6A1-205ENST00000492851 C8orf48Q96LL4 319 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 ELOVL4Q9GZR5 314 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 BLZF1Q9H2G9 400 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 EBF3Q9H4W6 596 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 VRTNQ9H8Y1 702 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 TRPC7Q9HCX4 862 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 DUS2Q9NX74 493 aaKnown RBP13.3□□□□□ -0.28
COL6A1-205ENST00000492851 DLL3Q9NYJ7 618 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 CCL26Q9Y258 94 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 PTPRJQ12913 1337 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 SCN1AP35498 2009 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 ZNF292O60281 2723 aa13.3□□□□□ -0.28
COL6A1-205ENST00000492851 PATJQ8NI35 1801 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 A8MXQ7 604 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 CHURC1-FNTBB4DL54 471 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 ATP2C2O75185 946 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 P4HA1P13674 534 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 PTPN1P18031 435 aaKnown RBP13.29□□□□□ -0.28
COL6A1-205ENST00000492851 TRIM21P19474 475 aaKnown RBP13.29□□□□□ -0.28
COL6A1-205ENST00000492851 BDNFP23560 247 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 CMA1P23946 247 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 IFNAR2P48551 515 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 CUL4BQ13620 913 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 TDRD10Q5VZ19 366 aaKnown RBP13.29□□□□□ -0.28
COL6A1-205ENST00000492851 SLC9A9Q8IVB4 645 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 CAMKK1Q8N5S9 505 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 RMDN1Q96DB5 314 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 PCED1BQ96HM7 432 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 CRTAC1Q9NQ79 661 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 HPS4Q9NQG7 708 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 RBM12Q9NTZ6 932 aaKnown RBP13.29□□□□□ -0.28
COL6A1-205ENST00000492851 EXOC1Q9NV70 894 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 ARHGAP26Q9UNA1 814 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 SLC8A2Q9UPR5 921 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 ATP6V1DQ9Y5K8 247 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 FAM186AA6NE01 2351 aa13.29□□□□□ -0.28
COL6A1-205ENST00000492851 COL4A2P08572 1712 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 K7ESF4 209 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 PDXKO00764 312 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 RPN1P04843 607 aaKnown RBP13.28□□□□□ -0.28
COL6A1-205ENST00000492851 FNTBP49356 437 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 GALK1P51570 392 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 PSMC1P62191 440 aaKnown RBP13.28□□□□□ -0.28
COL6A1-205ENST00000492851 CLDN10P78369 228 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 DNM1Q05193 864 aaKnown RBP13.28□□□□□ -0.28
COL6A1-205ENST00000492851 ZNF77Q15935 545 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 SCARA3Q6AZY7 606 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 PRR23BQ6ZRT6 265 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 WDR5BQ86VZ2 330 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 ARL14EPQ8N8R7 260 aaPredicted RBP13.28□□□□□ -0.28
COL6A1-205ENST00000492851 PAGE5Q96GU1 130 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 CCDC34Q96HJ3 373 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 TNIP3Q96KP6 325 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 SLITRK1Q96PX8 696 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 CYP2S1Q96SQ9 504 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 P2RY13Q9BPV8 354 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 TTLL2Q9BWV7 592 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 ECT2Q9H8V3 914 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 GCNT4Q9P109 453 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 NXF1Q9UBU9 619 aaKnown RBP13.28□□□□□ -0.28
COL6A1-205ENST00000492851 SERTAD1Q9UHV2 236 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 TICRRQ7Z2Z1 1910 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 ATP8B3O60423 1300 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 CACNA1IQ9P0X4 2223 aa13.28□□□□□ -0.28
COL6A1-205ENST00000492851 NUP210Q8TEM1 1887 aaPredicted RBP13.27□□□□□ -0.28
COL6A1-205ENST00000492851 SLC9A3R1O14745 358 aaPredicted RBP13.27□□□□□ -0.29
COL6A1-205ENST00000492851 IKBKBO14920 756 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms