RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 MMS19Q96T76 1030 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 PKMYT1Q99640 499 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 FAM83CQ9BQN1 747 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 DNAI2Q9GZS0 605 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 IKZF4Q9H2S9 585 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 SNX25Q9H3E2 840 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 GKN1Q9NS71 199 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 TMLHEQ9NVH6 421 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 GTSE1Q9NYZ3 720 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 COL4A3Q01955 1670 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 NCANO14594 1321 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 TRDMT1O14717 391 aaKnown RBP9.35□□□□□ -0.91
NUP50-217ENST00000491860 AKAP3O75969 853 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 CKMP06732 381 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 RETP07949 1114 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 SLFN14P0C7P3 912 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 P4HA1P13674 534 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 ACAT1P24752 427 aaKnown RBP9.35□□□□□ -0.91
NUP50-217ENST00000491860 CYP2F1P24903 491 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 GNL1P36915 607 aaPredicted RBP9.35□□□□□ -0.91
NUP50-217ENST00000491860 GRIK1P39086 918 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 IFNAR2P48551 515 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 CYP2J2P51589 502 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 WNT7BP56706 349 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 SATB1Q01826 763 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 CYP24A1Q07973 514 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 EHHADHQ08426 723 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 SIM2Q14190 667 aaPredicted RBP9.35□□□□□ -0.91
NUP50-217ENST00000491860 MTF1Q14872 753 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 PON2Q15165 354 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 DDR2Q16832 855 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 KNOP1Q1ED39 458 aaKnown RBP9.35□□□□□ -0.91
NUP50-217ENST00000491860 TMEM196Q5HYL7 178 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 TXNDC8Q6A555 127 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 TSSK4Q6SA08 328 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 TMEM150AQ86TG1 271 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 DDX42Q86XP3 938 aaKnown RBP eCLIP9.35□□□□□ -0.91
NUP50-217ENST00000491860 SCN4BQ8IWT1 228 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 ZSWIM2Q8NEG5 633 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 OR5B17Q8NGF7 314 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 MYCBPAPQ8TBZ2 947 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 SCFD1Q8WVM8 642 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 USP13Q92995 863 aaPredicted RBP9.35□□□□□ -0.91
NUP50-217ENST00000491860 CCDC34Q96HJ3 373 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 TNIP3Q96KP6 325 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 C8orf48Q96LL4 319 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 LRRC3BQ96PB8 259 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 FGFBP2Q9BYJ0 223 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 ELOVL4Q9GZR5 314 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 VRTNQ9H8Y1 702 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 TRPM5Q9NZQ8 1165 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 PCDHA7Q9UN72 937 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 SLC8A2Q9UPR5 921 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 ATP6V1DQ9Y5K8 247 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 PTPRDP23468 1912 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 GREB1Q4ZG55 1949 aa9.35□□□□□ -0.91
NUP50-217ENST00000491860 CHD6Q8TD26 2715 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 USP24Q9UPU5 2620 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 CHURC1-FNTBB4DL54 471 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 SLC9A3R1O14745 358 aaPredicted RBP9.34□□□□□ -0.91
NUP50-217ENST00000491860 EXOC3O60645 756 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 PHACTR2O75167 634 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 RTN3O95197 1032 aaPredicted RBP9.34□□□□□ -0.91
NUP50-217ENST00000491860 NFATC1O95644 943 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 SOX9P48436 509 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 NOP14P78316 857 aaKnown RBP9.34□□□□□ -0.91
NUP50-217ENST00000491860 CYP27A1Q02318 531 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 USP4Q13107 963 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 WDR72Q3MJ13 1102 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 LMBRD2Q68DH5 695 aaPredicted RBP9.34□□□□□ -0.91
NUP50-217ENST00000491860 PRR23BQ6ZRT6 265 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 WDR5BQ86VZ2 330 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 SLC9A9Q8IVB4 645 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 CAMKK1Q8N5S9 505 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 STKLD1Q8NE28 680 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 PDZD8Q8NEN9 1154 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 OSCP1Q8WVF1 389 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 KBTBD7Q8WVZ9 684 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 OVCA2Q8WZ82 227 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 MYLPFQ96A32 169 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 ACDQ96AP0 544 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 LOXL4Q96JB6 756 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 ZFYVE19Q96K21 471 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 SLITRK1Q96PX8 696 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 TTLL2Q9BWV7 592 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 TRPC7Q9HCX4 862 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 EXOC1Q9NV70 894 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 COMMD8Q9NX08 183 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 DUS2Q9NX74 493 aaKnown RBP9.34□□□□□ -0.91
NUP50-217ENST00000491860 RCOR1Q9UKL0 485 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 ARHGAP26Q9UNA1 814 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 MAP1BP46821 2468 aaKnown RBP9.34□□□□□ -0.91
NUP50-217ENST00000491860 ANAPC1Q9H1A4 1944 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 RALGAPA1Q6GYQ0 2036 aa9.34□□□□□ -0.91
NUP50-217ENST00000491860 SPAG17Q6Q759 2223 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 HELZP42694 1942 aaKnown RBP9.33□□□□□ -0.92
NUP50-217ENST00000491860 DCDC2BA2VCK2 349 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 A8MXQ7 604 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 K7ESF4 209 aa9.33□□□□□ -0.92
NUP50-217ENST00000491860 SLC30A4O14863 429 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms