RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 EML3Q32P44 896 aa9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 L1TD1Q5T7N2 865 aaKnown RBP9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 C11orf74Q86VG3 221 aa9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 RASSF3Q86WH2 238 aa9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 SFR1Q86XK3 245 aa9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 GLIS3Q8NEA6 775 aa9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 CACTINQ8WUQ7 758 aaKnown RBP9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 CD101Q93033 1021 aa9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 SPATA17Q96L03 361 aa9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 PI4K2AQ9BTU6 479 aa9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 PANK2Q9BZ23 570 aa9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 ZHX3Q9H4I2 956 aa9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 DUS2Q9NX74 493 aaKnown RBP9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 TBC1D7Q9P0N9 293 aa9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 ARHGAP26Q9UNA1 814 aa9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 MORC2Q9Y6X9 1032 aaPredicted RBP9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 ASCC3Q8N3C0 2202 aaKnown RBP9.07□□□□□ -0.96
APOBEC3F-204ENST00000491387 FRYQ5TBA9 3013 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 TRAV19A0A0A6YYK7 116 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 FRMD3A2A2Y4 597 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 MYMKA6NI61 221 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 K7ELQ4 463 aaPredicted RBP9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 KIAA0391O15091 583 aaKnown RBP9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 HUS1O60921 280 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 ITGB3P05106 788 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 FAM163BP0C2L3 166 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 CHRM1P11229 460 aaPredicted RBP9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 PCSK1P29120 753 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 POLR2BP30876 1174 aaKnown RBP9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 PDE6CP51160 858 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 RBP5P82980 135 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 NR1H3Q13133 447 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 DMC1Q14565 340 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 ELF2Q15723 593 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 SOWAHAQ2M3V2 549 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 NAIF1Q69YI7 327 aaPredicted RBP9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 VSTM1Q6UX27 236 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 FSIP1Q8NA03 581 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 RPLP0P6Q8NHW5 317 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 USP33Q8TEY7 942 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 HPS3Q969F9 1004 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 ACCSQ96QU6 501 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 SLC22A12Q96S37 553 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 CYP2S1Q96SQ9 504 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 FAM213AQ9BRX8 229 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 TTLL2Q9BWV7 592 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 DDX43Q9NXZ2 648 aaKnown RBP9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 TFIP11Q9UBB9 837 aaKnown RBP9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 SIX4Q9UIU6 781 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 GTF3C4Q9UKN8 822 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 AGAP1Q9UPQ3 857 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 WASF3Q9UPY6 502 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 PCDHB13Q9Y5F0 798 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 CACNA1EQ15878 2313 aa9.06□□□□□ -0.96
APOBEC3F-204ENST00000491387 PI4KAP42356 2102 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 PKD1L2Q7Z442 2459 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 MYO18AQ92614 2054 aaKnown RBP9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 A0A0A0MRY4 1105 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 CAVIN2O95810 425 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 OLFM2O95897 454 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 PROS1P07225 676 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 CSRP1P21291 193 aaKnown RBP9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 CASP1P29466 404 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 OPRD1P41143 372 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 EIF2DP41214 584 aaKnown RBP9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 PPP3CCP48454 512 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 IFNAR2P48551 515 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 TFAMQ00059 246 aaKnown RBP9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 MAPRE1Q15691 268 aaKnown RBP9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 CCDC6Q16204 474 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 GAB4Q2WGN9 574 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 HSF5Q4G112 596 aaPredicted RBP9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 SDHAF4Q5VUM1 108 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 PMS2CLQ68D20 193 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 RNF43Q68DV7 783 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 C4orf50Q6ZRC1 276 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 OSTM1Q86WC4 334 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 ADGRF2Q8IZF7 708 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 CSGALNACT2Q8N6G5 542 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 PDILTQ8N807 584 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 RASSF8Q8NHQ8 419 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 OLIG1Q8TAK6 271 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 SH3RF2Q8TEC5 729 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 CNOT6LQ96LI5 555 aaKnown RBP9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 HHIPQ96QV1 700 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 DUSP9Q99956 384 aaKnown RBP9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 LINC00597Q9H2U6 94 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 MRPL44Q9H9J2 332 aaKnown RBP9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 POLR3BQ9NW08 1133 aaPredicted RBP9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 RBAKQ9NYW8 714 aaPredicted RBP9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 CCDC39Q9UFE4 941 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 CDH9Q9ULB4 789 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 MAGED2Q9UNF1 606 aaPredicted RBP9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 SRPRBQ9Y5M8 271 aaKnown RBP9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 WNT6Q9Y6F9 365 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 ZZEF1O43149 2961 aa9.05□□□□□ -0.96
APOBEC3F-204ENST00000491387 THADAQ6YHU6 1953 aa9.04□□□□□ -0.96
APOBEC3F-204ENST00000491387 LNP1A1A4G5 178 aa9.04□□□□□ -0.96
APOBEC3F-204ENST00000491387 C2orf78A6NCI8 922 aa9.04□□□□□ -0.96
APOBEC3F-204ENST00000491387 K7EQS6 105 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms