RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 RC3H2Q9HBD1 1191 aaKnown RBP24.06■■□□□ 1.44
USF3-203ENST00000491165 TAS2R14Q9NYV8 317 aa24.06■■□□□ 1.44
USF3-203ENST00000491165 BCCIPQ9P287 314 aaKnown RBP eCLIP24.06■■□□□ 1.44
USF3-203ENST00000491165 SLC12A6Q9UHW9 1150 aa24.06■■□□□ 1.44
USF3-203ENST00000491165 CYP3A5P20815 502 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 DR1Q01658 176 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 TRPC3Q13507 836 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 ODF2Q5BJF6 829 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 FMO2Q99518 471 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 GGA2Q9UJY4 613 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 NR2E1Q9Y466 385 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 TBKBP1A7MCY6 615 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 SPTLC1O15269 473 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 LRPAP1P30533 357 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 MAGEA10P43363 369 aaPredicted RBP24.05■■□□□ 1.44
USF3-203ENST00000491165 PPP2R2AP63151 447 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 DSC1Q08554 894 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 SPDYCQ5MJ68 293 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 RHOT2Q8IXI1 618 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 ABI1Q8IZP0 508 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 TSPAN18Q96SJ8 248 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 AGPAT1Q99943 283 aa24.05■■□□□ 1.44
USF3-203ENST00000491165 LBHD1Q9BQE6 289 aaPredicted RBP24.05■■□□□ 1.44
USF3-203ENST00000491165 PPANQ9NQ55 473 aaKnown RBP24.05■■□□□ 1.44
USF3-203ENST00000491165 FOXN3O00409 490 aaPredicted RBP24.04■■□□□ 1.44
USF3-203ENST00000491165 PPFIA2O75334 1257 aa24.04■■□□□ 1.44
USF3-203ENST00000491165 AMHP03971 560 aa24.04■■□□□ 1.44
USF3-203ENST00000491165 UPP1Q16831 310 aa24.04■■□□□ 1.44
USF3-203ENST00000491165 KCTD19Q17RG1 926 aaPredicted RBP24.04■■□□□ 1.44
USF3-203ENST00000491165 C9orf50Q5SZB4 431 aa24.04■■□□□ 1.44
USF3-203ENST00000491165 PSRC1Q6PGN9 363 aaPredicted RBP24.04■■□□□ 1.44
USF3-203ENST00000491165 PALB2Q86YC2 1186 aa24.04■■□□□ 1.44
USF3-203ENST00000491165 PPM1KQ8N3J5 372 aa24.04■■□□□ 1.44
USF3-203ENST00000491165 KREMEN1Q96MU8 473 aa24.04■■□□□ 1.44
USF3-203ENST00000491165 TRIM31Q9BZY9 425 aa24.04■■□□□ 1.44
USF3-203ENST00000491165 SLC38A7Q9NVC3 462 aa24.04■■□□□ 1.44
USF3-203ENST00000491165 POLIQ9UNA4 740 aa24.04■■□□□ 1.44
USF3-203ENST00000491165 COG5Q9UP83 839 aa24.04■■□□□ 1.44
USF3-203ENST00000491165 ITGB1P05556 798 aa24.04■■□□□ 1.44
USF3-203ENST00000491165 HADHBP55084 474 aaKnown RBP24.04■■□□□ 1.44
USF3-203ENST00000491165 RBP5P82980 135 aa24.04■■□□□ 1.44
USF3-203ENST00000491165 TUSC3Q13454 348 aa24.04■■□□□ 1.44
USF3-203ENST00000491165 ZNF699Q32M78 642 aa24.04■■□□□ 1.44
USF3-203ENST00000491165 ZNF689Q96CS4 500 aaPredicted RBP24.04■■□□□ 1.44
USF3-203ENST00000491165 HPDLQ96IR7 371 aa24.04■■□□□ 1.44
USF3-203ENST00000491165 UBE2TQ9NPD8 197 aaPredicted RBP24.04■■□□□ 1.44
USF3-203ENST00000491165 EFCAB14O75071 495 aa24.03■■□□□ 1.44
USF3-203ENST00000491165 DHX34Q14147 1143 aaKnown RBP24.03■■□□□ 1.44
USF3-203ENST00000491165 SGSM1Q2NKQ1 1148 aa24.03■■□□□ 1.44
USF3-203ENST00000491165 WDR72Q3MJ13 1102 aa24.03■■□□□ 1.44
USF3-203ENST00000491165 KRT71Q3SY84 523 aa24.03■■□□□ 1.44
USF3-203ENST00000491165 MMS22LQ6ZRQ5 1243 aa24.03■■□□□ 1.44
USF3-203ENST00000491165 COLGALT2Q8IYK4 626 aa24.03■■□□□ 1.44
USF3-203ENST00000491165 C3orf20Q8ND61 904 aa24.03■■□□□ 1.44
USF3-203ENST00000491165 ERP44Q9BS26 406 aa24.03■■□□□ 1.44
USF3-203ENST00000491165 NOVA2Q9UNW9 492 aaKnown RBP24.03■■□□□ 1.44
USF3-203ENST00000491165 FAM187AA6NFU0 413 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 XPOTO43592 962 aaKnown RBP24.02■■□□□ 1.44
USF3-203ENST00000491165 PBX3P40426 434 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 EIF3BP55884 814 aaKnown RBP24.02■■□□□ 1.44
USF3-203ENST00000491165 ZNF211Q13398 564 aaPredicted RBP24.02■■□□□ 1.44
USF3-203ENST00000491165 ICE2Q659A1 982 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 DUPD1Q68J44 220 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 CD300LGQ6UXG3 332 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 ADAT2Q7Z6V5 191 aaKnown RBP24.02■■□□□ 1.44
USF3-203ENST00000491165 URGCPQ8TCY9 931 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 HERVK_113Q902F9 699 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 NT5C1BQ96P26 610 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 TXLNGYQ9BZA5 131 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 NRDE2Q9H7Z3 1164 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 NXF1Q9UBU9 619 aaKnown RBP24.02■■□□□ 1.44
USF3-203ENST00000491165 ATP8A1Q9Y2Q0 1164 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 GMNCA6NCL1 334 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 PODXLO00592 558 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 IFFO1Q0D2I5 559 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 C11orf63Q6NUN7 778 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 HASPINQ8TF76 798 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 SLC20A1Q8WUM9 679 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 ALG3Q92685 438 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 NR2E3Q9Y5X4 410 aa24.02■■□□□ 1.44
USF3-203ENST00000491165 MIF4GDA9UHW6 222 aaKnown RBP24.01■■□□□ 1.43
USF3-203ENST00000491165 TRAPPC3O43617 180 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 FSBPO95073 299 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 ASPAP45381 313 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 LILRA4P59901 499 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 RNASELQ05823 741 aaKnown RBP24.01■■□□□ 1.43
USF3-203ENST00000491165 WDR44Q5JSH3 913 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 SCARA5Q6ZMJ2 495 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 CYFIP2Q96F07 1278 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 VRTNQ9H8Y1 702 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 ALG6Q9Y672 507 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 CAPN7Q9Y6W3 813 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 KIAA1671Q9BY89 1806 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 FAM170AA1A519 330 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 HOXA2O43364 376 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 ZC3H11AO75152 810 aaKnown RBP eCLIP24.01■■□□□ 1.43
USF3-203ENST00000491165 MAGOHP61326 146 aaKnown RBP24.01■■□□□ 1.43
USF3-203ENST00000491165 UBL4BQ8N7F7 174 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 MAGOHBQ96A72 148 aaKnown RBP24.01■■□□□ 1.43
USF3-203ENST00000491165 IMPG2Q9BZV3 1241 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms