RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 TMEM2Q9UHN6 1383 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 HEG1Q9ULI3 1381 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 TECPR2O15040 1411 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 PTPRUQ92729 1446 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 LRRC7Q96NW7 1537 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 FRMPD1Q5SYB0 1578 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 SPATA31D1Q6ZQQ2 1576 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 RICTORQ6R327 1708 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 TRGV11A0A075B6L2 103 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 FAM237AA0A1B0GTK4 181 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 A0A1B0GTW7 788 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 TLDC2A0PJX2 215 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 PIPSLA2A3N6 862 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 CCDC69A6NI79 296 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 TMEM200CA6NKL6 621 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 EFCAB8A8MWE9 144 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 GRXCR1A8MXD5 290 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 CXorf49A8MYA2 514 aaPredicted RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 ZNF213O14771 459 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 RNF113AO15541 343 aaKnown RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 TEX33O43247 280 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 KCNQ3O43525 872 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 PEX1O43933 1283 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 STX10O60499 249 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 SPDEFO95238 335 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 YEATS4O95619 227 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 SLC3A2P08195 630 aaKnown RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 CDK4P11802 303 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 ALAS1P13196 640 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 CPA1P15085 419 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 CDK11BP21127 795 aaKnown RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 IL15P40933 162 aaPredicted RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 ME1P48163 572 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 UBASH3AP57075 661 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 TIMM10P62072 90 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 MRPS9P82933 396 aaKnown RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 SRSF2Q01130 221 aaKnown RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 TRDNQ13061 729 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 GPS2Q13227 327 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 SLC39A14Q15043 492 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 CSRP2Q16527 193 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 STX1AQ16623 288 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 CCDC142Q17RM4 750 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 BEAN1Q3B7T3 259 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 RABL6Q3YEC7 729 aaPredicted RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 FAM153CQ494X1 144 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 CCDC158Q5M9N0 1113 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 FAM102AQ5T9C2 384 aaPredicted RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 KAZNQ674X7 775 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 ARMC6Q6NXE6 501 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 ZNF790Q6PG37 636 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 CPLX2Q6PUV4 134 aaKnown RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 OLFM4Q6UX06 510 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 Q6YL49 198 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 ZNF771Q7L3S4 317 aaPredicted RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 STRA8Q7Z7C7 330 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 JAZF1Q86VZ6 243 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 SYT12Q8IV01 421 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 KRT222Q8N1A0 295 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 AOPEPQ8N6M6 819 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 BOLLQ8N9W6 283 aaKnown RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 LINC00301Q8NCQ3 95 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 CLRN3Q8NCR9 226 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 TOR1AIP2Q8NFQ8 470 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 OR7D4Q8NG98 312 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 PLBD2Q8NHP8 589 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 BICD2Q8TD16 824 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 KCNG4Q8TDN1 519 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 DPF2Q92785 391 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 GTF3C6Q969F1 213 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 LTV1Q96GA3 475 aaPredicted RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 MARS2Q96GW9 593 aaKnown RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 CCDC34Q96HJ3 373 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 FUBP3Q96I24 572 aaKnown RBP eCLIP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 FBXL20Q96IG2 436 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 FAM227BQ96M60 508 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 NEUROD6Q96NK8 337 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 FSD1Q9BTV5 496 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 TEX13AQ9BXU3 409 aaPredicted RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 ENKD1Q9H0I2 346 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 TSPYL1Q9H0U9 437 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 IL25Q9H293 177 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 TMX1Q9H3N1 280 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 BICC1Q9H694 974 aaKnown RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 MANSC1Q9H8J5 431 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 BCO1Q9HAY6 547 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 GALNT9Q9HCQ5 603 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 DMRT3Q9NQL9 472 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 ARGLU1Q9NWB6 273 aaPredicted RBP2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 CHPF2Q9P2E5 772 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 TMPRSS11EQ9UL52 423 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 PYCARDQ9ULZ3 195 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 PCDHA7Q9UN72 937 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 ACTL7AQ9Y615 435 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 COL15A1P39059 1388 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 CEMIPQ8WUJ3 1361 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 PLEKHG1Q9ULL1 1385 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 USP6P35125 1406 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 CPS1P31327 1500 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 C3P01024 1663 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms