RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 PCDHB13Q9Y5F0 798 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 WNT6Q9Y6F9 365 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 CEP192Q8TEP8 1941 aa16.68■□□□□ 0.26
COL2A1-207ENST00000490609 HUS1O60921 280 aa16.68■□□□□ 0.26
COL2A1-207ENST00000490609 RPP40O75818 363 aaKnown RBP16.68■□□□□ 0.26
COL2A1-207ENST00000490609 FAM160A1Q05DH4 1040 aa16.68■□□□□ 0.26
COL2A1-207ENST00000490609 GRSF1Q12849 480 aaKnown RBP eCLIP16.68■□□□□ 0.26
COL2A1-207ENST00000490609 MTF1Q14872 753 aa16.68■□□□□ 0.26
COL2A1-207ENST00000490609 SLC39A14Q15043 492 aa16.68■□□□□ 0.26
COL2A1-207ENST00000490609 E2F4Q16254 413 aa16.68■□□□□ 0.26
COL2A1-207ENST00000490609 CEP68Q76N32 757 aa16.68■□□□□ 0.26
COL2A1-207ENST00000490609 CBWD2Q8IUF1 395 aa16.68■□□□□ 0.26
COL2A1-207ENST00000490609 ADGRF2Q8IZF7 708 aa16.68■□□□□ 0.26
COL2A1-207ENST00000490609 ARL14EPQ8N8R7 260 aaPredicted RBP16.68■□□□□ 0.26
COL2A1-207ENST00000490609 MRPS31Q92665 395 aaKnown RBP16.68■□□□□ 0.26
COL2A1-207ENST00000490609 P2RY13Q9BPV8 354 aa16.68■□□□□ 0.26
COL2A1-207ENST00000490609 DUSP15Q9H1R2 295 aaPredicted RBP16.68■□□□□ 0.26
COL2A1-207ENST00000490609 PANK4Q9NVE7 773 aa16.68■□□□□ 0.26
COL2A1-207ENST00000490609 EXOC7Q9UPT5 735 aa16.68■□□□□ 0.26
COL2A1-207ENST00000490609 MTMR6Q9Y217 621 aa16.68■□□□□ 0.26
COL2A1-207ENST00000490609 PCNX2A6NKB5 2137 aa16.67■□□□□ 0.26
COL2A1-207ENST00000490609 PLXND1Q9Y4D7 1925 aa16.67■□□□□ 0.26
COL2A1-207ENST00000490609 DCLK1O15075 740 aa16.67■□□□□ 0.26
COL2A1-207ENST00000490609 LDHAP00338 332 aaKnown RBP16.67■□□□□ 0.26
COL2A1-207ENST00000490609 CST3P01034 146 aaPredicted RBP16.67■□□□□ 0.26
COL2A1-207ENST00000490609 IDEP14735 1019 aa16.67■□□□□ 0.26
COL2A1-207ENST00000490609 MAGEA11P43364 429 aa16.67■□□□□ 0.26
COL2A1-207ENST00000490609 LIMK1P53667 647 aa16.67■□□□□ 0.26
COL2A1-207ENST00000490609 RPL10AP62906 217 aaKnown RBP16.67■□□□□ 0.26
COL2A1-207ENST00000490609 RBP5P82980 135 aa16.67■□□□□ 0.26
COL2A1-207ENST00000490609 MESP2Q0VG99 397 aa16.67■□□□□ 0.26
COL2A1-207ENST00000490609 PDGFRLQ15198 375 aa16.67■□□□□ 0.26
COL2A1-207ENST00000490609 PLK5Q496M5 336 aa16.67■□□□□ 0.26
COL2A1-207ENST00000490609 CACNA2D4Q7Z3S7 1137 aa16.67■□□□□ 0.26
COL2A1-207ENST00000490609 SPATA18Q8TC71 538 aa16.67■□□□□ 0.26
COL2A1-207ENST00000490609 CACTINQ8WUQ7 758 aaKnown RBP16.67■□□□□ 0.26
COL2A1-207ENST00000490609 LOXL4Q96JB6 756 aa16.67■□□□□ 0.26
COL2A1-207ENST00000490609 HHIPQ96QV1 700 aa16.67■□□□□ 0.26
COL2A1-207ENST00000490609 RNF38Q9H0F5 515 aa16.67■□□□□ 0.26
COL2A1-207ENST00000490609 DUS2Q9NX74 493 aaKnown RBP16.67■□□□□ 0.26
COL2A1-207ENST00000490609 MYH10P35580 1976 aa16.67■□□□□ 0.26
COL2A1-207ENST00000490609 TGFB1I1O43294 461 aa16.66■□□□□ 0.26
COL2A1-207ENST00000490609 KRT19P08727 400 aa16.66■□□□□ 0.26
COL2A1-207ENST00000490609 TCF3P15923 654 aa16.66■□□□□ 0.26
COL2A1-207ENST00000490609 DRD1P21728 446 aa16.66■□□□□ 0.26
COL2A1-207ENST00000490609 OPRD1P41143 372 aa16.66■□□□□ 0.26
COL2A1-207ENST00000490609 LHX1P48742 406 aa16.66■□□□□ 0.26
COL2A1-207ENST00000490609 CACNA2D1P54289 1103 aa16.66■□□□□ 0.26
COL2A1-207ENST00000490609 PSMC1P62191 440 aaKnown RBP16.66■□□□□ 0.26
COL2A1-207ENST00000490609 MYL7Q01449 175 aa16.66■□□□□ 0.26
COL2A1-207ENST00000490609 EPM2AIP1Q7L775 607 aaPredicted RBP16.66■□□□□ 0.26
COL2A1-207ENST00000490609 SFTPA1Q8IWL2 248 aa16.66■□□□□ 0.26
COL2A1-207ENST00000490609 GPD1LQ8N335 351 aa16.66■□□□□ 0.26
COL2A1-207ENST00000490609 CAMKK1Q8N5S9 505 aa16.66■□□□□ 0.26
COL2A1-207ENST00000490609 RPLP0P6Q8NHW5 317 aa16.66■□□□□ 0.26
COL2A1-207ENST00000490609 SH3RF2Q8TEC5 729 aa16.66■□□□□ 0.26
COL2A1-207ENST00000490609 FUBP3Q96I24 572 aaKnown RBP eCLIP16.66■□□□□ 0.26
COL2A1-207ENST00000490609 TMEM206Q9H813 350 aa16.66■□□□□ 0.26
COL2A1-207ENST00000490609 TRPC7Q9HCX4 862 aa16.66■□□□□ 0.26
COL2A1-207ENST00000490609 K7EQS6 105 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 ATG13O75143 517 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 USP17L7P0C7H9 530 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 BDNFP23560 247 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 N4BP2L1Q5TBK1 243 aaPredicted RBP16.65■□□□□ 0.26
COL2A1-207ENST00000490609 TCEAL6Q6IPX3 200 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 CCDC73Q6ZRK6 1079 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 SYT13Q7L8C5 426 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 DPH6Q7L8W6 267 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 SPATA2LQ8IUW3 424 aaPredicted RBP16.65■□□□□ 0.26
COL2A1-207ENST00000490609 SCN4BQ8IWT1 228 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 SYCP3Q8IZU3 236 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 PDILTQ8N807 584 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 ZNF516Q92618 1163 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 TCEAL3Q969E4 200 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 MYLPFQ96A32 169 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 HPDLQ96IR7 371 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 SPATA17Q96L03 361 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 SYT15Q9BQS2 421 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 MRPL45Q9BRJ2 306 aaKnown RBP16.65■□□□□ 0.26
COL2A1-207ENST00000490609 KBTBD4Q9NVX7 518 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 UXTQ9UBK9 157 aaPredicted RBP16.65■□□□□ 0.26
COL2A1-207ENST00000490609 EBF1Q9UH73 591 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 ARHGAP26Q9UNA1 814 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 SLC8A2Q9UPR5 921 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 DSPP15924 2871 aaKnown RBP16.65■□□□□ 0.26
COL2A1-207ENST00000490609 NBEAQ8NFP9 2946 aa16.65■□□□□ 0.26
COL2A1-207ENST00000490609 IGF2RP11717 2491 aa16.64■□□□□ 0.26
COL2A1-207ENST00000490609 TRAV19A0A0A6YYK7 116 aa16.64■□□□□ 0.25
COL2A1-207ENST00000490609 AKAP3O75969 853 aa16.64■□□□□ 0.25
COL2A1-207ENST00000490609 PDGFRBP09619 1106 aa16.64■□□□□ 0.25
COL2A1-207ENST00000490609 HNRNPLP14866 589 aaKnown RBP eCLIP16.64■□□□□ 0.25
COL2A1-207ENST00000490609 HDCP19113 662 aa16.64■□□□□ 0.25
COL2A1-207ENST00000490609 WARSP23381 471 aaKnown RBP16.64■□□□□ 0.25
COL2A1-207ENST00000490609 STAT6P42226 847 aa16.64■□□□□ 0.25
COL2A1-207ENST00000490609 NASPP49321 788 aaPredicted RBP16.64■□□□□ 0.25
COL2A1-207ENST00000490609 EHHADHQ08426 723 aa16.64■□□□□ 0.25
COL2A1-207ENST00000490609 ALCAMQ13740 583 aa16.64■□□□□ 0.25
COL2A1-207ENST00000490609 CC2D1AQ6P1N0 951 aaPredicted RBP16.64■□□□□ 0.25
COL2A1-207ENST00000490609 ZNF507Q8TCN5 953 aa16.64■□□□□ 0.25
COL2A1-207ENST00000490609 CD101Q93033 1021 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms