RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 PIEZO2Q9H5I5 2752 aa14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 MAOBP27338 520 aa14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 EIF2S3P41091 472 aaKnown RBP14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 NPTX2P47972 431 aa14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 PEX3P56589 373 aa14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 LILRA4P59901 499 aa14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 NR5A1Q13285 461 aa14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 ZBTB6Q15916 424 aa14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 ARL14EPQ8N8R7 260 aaPredicted RBP14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 SPPL2BQ8TCT7 592 aa14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 LRRC15Q8TF66 581 aa14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 KIFAP3Q92845 792 aa14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 YTHDC1Q96MU7 727 aaKnown RBP14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 MTMR9Q96QG7 549 aa14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 LARP6Q9BRS8 491 aaKnown RBP14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 TMEM206Q9H813 350 aa14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 UBQLN1Q9UMX0 589 aaKnown RBP14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 STK36Q9NRP7 1315 aa14.8□□□□□ -0.04
EXOSC3-207ENST00000490516 TRAV19A0A0A6YYK7 116 aa14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 C2orf78A6NCI8 922 aa14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 PLK4O00444 970 aa14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 TLX3O43711 291 aaPredicted RBP14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 KAT7O95251 611 aa14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 CYP17A1P05093 508 aa14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 COL5A1P20908 1838 aaPredicted RBP14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 KCNC4Q03721 635 aa14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 KDSRQ06136 332 aa14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 SCRN1Q12765 414 aa14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 HSF5Q4G112 596 aaPredicted RBP14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 LRRC69Q6ZNQ3 347 aa14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 C12orf40Q86WS4 652 aa14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 ERLEC1Q96DZ1 483 aa14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 PNKPQ96T60 521 aa14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 TMEM134Q9H6X4 195 aa14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 CYP8B1Q9UNU6 501 aa14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 SNX14Q9Y5W7 946 aa14.79□□□□□ -0.04
EXOSC3-207ENST00000490516 PTPN13Q12923 2485 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 TMEM131Q92545 1883 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 TTC26A0AVF1 554 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 MYMKA6NI61 221 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 NEMFO60524 1076 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 APODP05090 189 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 CSH1P0DML2 217 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 CSH2P0DML3 217 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 CYP3A5P20815 502 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 ZXDBP98169 803 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 STK3Q13188 491 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 TOB2Q14106 344 aaPredicted RBP14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 NOLC1Q14978 699 aaKnown RBP eCLIP14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 CCDC157Q569K6 752 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 RHBDD1Q8TEB9 315 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 C2orf15Q8WU43 125 aaKnown RBP14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 KCNB2Q92953 911 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 KIF2CQ99661 725 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 TMEM60Q9H2L4 133 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 FAM124BQ9H5Z6 455 aaPredicted RBP14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 GAREM1Q9H706 876 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 CD93Q9NPY3 652 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 TMLHEQ9NVH6 421 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 GCNT4Q9P109 453 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 ARHGAP28Q9P2N2 729 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 SUSD2Q9UGT4 822 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 DNMT3LQ9UJW3 386 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 FNDC3AQ9Y2H6 1198 aaKnown RBP14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 MYH11P35749 1972 aa14.78□□□□□ -0.04
EXOSC3-207ENST00000490516 KNTC1P50748 2209 aa14.77□□□□□ -0.04
EXOSC3-207ENST00000490516 TEX51A0A1B0GUA7 166 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 CAPN8A6NHC0 703 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 CYP11A1P05108 521 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 HLA-EP13747 358 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 GNSP15586 552 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 TNFSF9P41273 254 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 SRSF1Q07955 248 aaKnown RBP eCLIP14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 SMAD1Q15797 465 aaKnown RBP14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 DDR2Q16832 855 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 GPR155Q7Z3F1 870 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 FAM181AQ8N9Y4 354 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 SPATA18Q8TC71 538 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 TNFRSF25Q93038 417 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 ZNF419Q96HQ0 510 aaPredicted RBP14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 CDC6Q99741 560 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 PI4K2AQ9BTU6 479 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 ZDHHC5Q9C0B5 715 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 HAPLN2Q9GZV7 340 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 BHMT2Q9H2M3 363 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 PLEKHA5Q9HAU0 1116 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 TM7SF3Q9NS93 570 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 BTBD3Q9Y2F9 522 aa14.77□□□□□ -0.05
EXOSC3-207ENST00000490516 MYLKQ15746 1914 aa14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 LACTBL1A8MY62 500 aa14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 SCAMP3O14828 347 aaKnown RBP14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 CILPO75339 1184 aa14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 PRPF40AO75400 957 aaKnown RBP14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 TOM1L1O75674 476 aa14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 RPA1P27694 616 aa14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 WASP42768 502 aa14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 SEMG2Q02383 582 aa14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 RESTQ13127 1097 aa14.76□□□□□ -0.05
EXOSC3-207ENST00000490516 DHCR24Q15392 516 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms