RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 NTHL1P78549 312 aa16.68■□□□□ 0.26
PCCB-218ENST00000490504 SURF1Q15526 300 aa16.68■□□□□ 0.26
PCCB-218ENST00000490504 ZACNQ401N2 412 aa16.68■□□□□ 0.26
PCCB-218ENST00000490504 JADE1Q6IE81 842 aa16.68■□□□□ 0.26
PCCB-218ENST00000490504 GRASPQ7Z6J2 395 aaPredicted RBP16.68■□□□□ 0.26
PCCB-218ENST00000490504 UBALD2Q8IYN6 164 aa16.68■□□□□ 0.26
PCCB-218ENST00000490504 FAM81BQ96LP2 452 aa16.68■□□□□ 0.26
PCCB-218ENST00000490504 PTPRJQ12913 1337 aa16.68■□□□□ 0.26
PCCB-218ENST00000490504 MYH10P35580 1976 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 CTAGE9A4FU28 777 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 FOXN3O00409 490 aaPredicted RBP16.67■□□□□ 0.26
PCCB-218ENST00000490504 PPEF2O14830 753 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 PDGFBP01127 241 aaPredicted RBP16.67■□□□□ 0.26
PCCB-218ENST00000490504 ARPP19P56211 112 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 ROR1Q01973 937 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 TDRD10Q5VZ19 366 aaKnown RBP16.67■□□□□ 0.26
PCCB-218ENST00000490504 LMBRD2Q68DH5 695 aaPredicted RBP16.67■□□□□ 0.26
PCCB-218ENST00000490504 SLC8B1Q6J4K2 584 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 PPM1KQ8N3J5 372 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 SECISBP2LQ93073 1101 aaKnown RBP16.67■□□□□ 0.26
PCCB-218ENST00000490504 NAPGQ99747 312 aaPredicted RBP16.67■□□□□ 0.26
PCCB-218ENST00000490504 KCNK12Q9HB15 430 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 ARIH1Q9Y4X5 557 aaPredicted RBP16.67■□□□□ 0.26
PCCB-218ENST00000490504 ATP8B3O60423 1300 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 H7C4K7 107 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 HLA-DRAP01903 254 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 NFICP08651 508 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 HOXA9P31269 272 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 PIK3CAP42336 1068 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 BIRC3Q13489 604 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 GET4Q7L5D6 327 aaPredicted RBP16.67■□□□□ 0.26
PCCB-218ENST00000490504 ENOSF1Q7L5Y1 443 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 WDR49Q8IV35 697 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 CD302Q8IX05 232 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 RSAD2Q8WXG1 361 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 KREMEN1Q96MU8 473 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 EPS15L1Q9UBC2 864 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 PCDHB8Q9UN66 801 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 POLIQ9UNA4 740 aa16.67■□□□□ 0.26
PCCB-218ENST00000490504 TIMM13Q9Y5L4 95 aaPredicted RBP16.67■□□□□ 0.26
PCCB-218ENST00000490504 WDR27A2RRH5 827 aa16.66■□□□□ 0.26
PCCB-218ENST00000490504 ABLIM3O94929 683 aa16.66■□□□□ 0.26
PCCB-218ENST00000490504 GCNT1Q02742 428 aa16.66■□□□□ 0.26
PCCB-218ENST00000490504 CTXN3Q4LDR2 81 aa16.66■□□□□ 0.26
PCCB-218ENST00000490504 WDR44Q5JSH3 913 aa16.66■□□□□ 0.26
PCCB-218ENST00000490504 FBXL6Q8N531 539 aa16.66■□□□□ 0.26
PCCB-218ENST00000490504 APPL2Q8NEU8 664 aa16.66■□□□□ 0.26
PCCB-218ENST00000490504 ZNF461Q8TAF7 563 aa16.66■□□□□ 0.26
PCCB-218ENST00000490504 SHC3Q92529 594 aa16.66■□□□□ 0.26
PCCB-218ENST00000490504 TSPAN18Q96SJ8 248 aa16.66■□□□□ 0.26
PCCB-218ENST00000490504 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.66■□□□□ 0.262e-23■■■■■ 142.5
PCCB-218ENST00000490504 NAGPAQ9UK23 515 aa16.66■□□□□ 0.26
PCCB-218ENST00000490504 NENFQ9UMX5 172 aa16.66■□□□□ 0.26
PCCB-218ENST00000490504 DUSP10Q9Y6W6 482 aa16.66■□□□□ 0.26
PCCB-218ENST00000490504 VWA8A3KMH1 1905 aa16.66■□□□□ 0.26
PCCB-218ENST00000490504 MACROD2A1Z1Q3 448 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 M0QZQ0 153 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 XPOTO43592 962 aaKnown RBP16.65■□□□□ 0.26
PCCB-218ENST00000490504 XYLBO75191 536 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 SLU7O95391 586 aaKnown RBP16.65■□□□□ 0.26
PCCB-218ENST00000490504 LAMP2P13473 410 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 FSHRP23945 695 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 PLA2G5P39877 138 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 AARSP49588 968 aaKnown RBP eCLIP16.65■□□□□ 0.26
PCCB-218ENST00000490504 TDGQ13569 410 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 TUBB2AQ13885 445 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 ALKBH5Q6P6C2 394 aaKnown RBP16.65■□□□□ 0.26
PCCB-218ENST00000490504 FAM71AQ8IYT1 594 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 ST13P5Q8NFI4 369 aaPredicted RBP16.65■□□□□ 0.26
PCCB-218ENST00000490504 BEST2Q8NFU1 509 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 KAT5Q92993 513 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 FAM84AQ96KN4 292 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 SYT11Q9BT88 431 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 TUBB2BQ9BVA1 445 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 HCFC1R1Q9NWW0 138 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.65■□□□□ 0.26
PCCB-218ENST00000490504 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.65■□□□□ 0.26
PCCB-218ENST00000490504 TRIP11Q15643 1979 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 CITO14578 2027 aa16.65■□□□□ 0.26
PCCB-218ENST00000490504 DDX3XO00571 662 aaKnown RBP eCLIP16.64■□□□□ 0.253e-13■■■■□ 24.8
PCCB-218ENST00000490504 TACC1O75410 805 aa16.64■□□□□ 0.25
PCCB-218ENST00000490504 IL18RAPO95256 599 aa16.64■□□□□ 0.25
PCCB-218ENST00000490504 SEC24AO95486 1093 aa16.64■□□□□ 0.25
PCCB-218ENST00000490504 VNN1O95497 513 aa16.64■□□□□ 0.25
PCCB-218ENST00000490504 POU2F2P09086 479 aa16.64■□□□□ 0.25
PCCB-218ENST00000490504 POU5F1Q01860 360 aaKnown RBP16.64■□□□□ 0.25
PCCB-218ENST00000490504 TMEM132DQ14C87 1099 aa16.64■□□□□ 0.25
PCCB-218ENST00000490504 IER5LQ5T953 404 aa16.64■□□□□ 0.25
PCCB-218ENST00000490504 ZNF280DQ6N043 979 aa16.64■□□□□ 0.25
PCCB-218ENST00000490504 RTL10Q7L3V2 364 aa16.64■□□□□ 0.25
PCCB-218ENST00000490504 SUGP1Q8IWZ8 645 aaKnown RBP16.64■□□□□ 0.25
PCCB-218ENST00000490504 RNF10Q8N5U6 811 aaKnown RBP16.64■□□□□ 0.25
PCCB-218ENST00000490504 TRIM58Q8NG06 486 aa16.64■□□□□ 0.25
PCCB-218ENST00000490504 OR5B17Q8NGF7 314 aa16.64■□□□□ 0.25
PCCB-218ENST00000490504 SLC30A5Q8TAD4 765 aa16.64■□□□□ 0.25
PCCB-218ENST00000490504 OLIG1Q8TAK6 271 aa16.64■□□□□ 0.25
PCCB-218ENST00000490504 TATDN2Q93075 761 aa16.64■□□□□ 0.25
PCCB-218ENST00000490504 FAM122AQ96E09 287 aa16.64■□□□□ 0.25
PCCB-218ENST00000490504 PI4K2AQ9BTU6 479 aa16.64■□□□□ 0.25
PCCB-218ENST00000490504 ASB7Q9H672 318 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms