RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 LGMNQ99538 433 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 FAM117AQ9C073 453 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 KIF9Q9HAQ2 790 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 BRMS1Q9HCU9 246 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 SUSD2Q9UGT4 822 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 CYP8B1Q9UNU6 501 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 NUB1Q9Y5A7 615 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 TIMM13Q9Y5L4 95 aaPredicted RBP7.93□□□□□ -1.14
COL9A1-209ENST00000489861 HEMK1Q9Y5R4 338 aaPredicted RBP7.93□□□□□ -1.14
COL9A1-209ENST00000489861 CRYBG3Q68DQ2 2970 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 MYH10P35580 1976 aa7.93□□□□□ -1.14
COL9A1-209ENST00000489861 CELSR2Q9HCU4 2923 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 PCNX1Q96RV3 2341 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 A0A1B0GTW7 788 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 N4BP3O15049 544 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 OAZ2O95190 189 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 LARGE1O95461 756 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 CER1O95813 267 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 AFPP02771 609 aaKnown RBP7.92□□□□□ -1.14
COL9A1-209ENST00000489861 F11P03951 625 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 CENPBP07199 599 aaPredicted RBP7.92□□□□□ -1.14
COL9A1-209ENST00000489861 GNSP15586 552 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 RPS6KB1P23443 525 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 ZNF77Q15935 545 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 FAM187BQ17R55 369 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 Q4G0T1 1027 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 EOGTQ5NDL2 527 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 ALKAL1Q6UXT8 129 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 ATG14Q6ZNE5 492 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 ITIH5Q86UX2 942 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 C4orf19Q8IY42 314 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 ZCCHC9Q8N567 271 aaKnown RBP7.92□□□□□ -1.14
COL9A1-209ENST00000489861 CEP120Q8N960 986 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 TTC16Q8NEE8 873 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 APPL2Q8NEU8 664 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 DNASE2BQ8WZ79 361 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 C18orf25Q96B23 403 aaPredicted RBP7.92□□□□□ -1.14
COL9A1-209ENST00000489861 PRIMPOLQ96LW4 560 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 PHF12Q96QT6 1004 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 SLC22A12Q96S37 553 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 LXNQ9BS40 222 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 SLC26A6Q9BXS9 759 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 AGXT2Q9BYV1 514 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 TM6SF1Q9BZW5 370 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 PRMT7Q9NVM4 692 aaPredicted RBP7.92□□□□□ -1.14
COL9A1-209ENST00000489861 RGL1Q9NZL6 768 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 VAV3Q9UKW4 847 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 BRPF3Q9ULD4 1205 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 PCDHB8Q9UN66 801 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 PCDHA4Q9UN74 947 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 MAN2B2Q9Y2E5 1009 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 CYP46A1Q9Y6A2 500 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 MTORP42345 2549 aa7.92□□□□□ -1.14
COL9A1-209ENST00000489861 DOCK9Q9BZ29 2069 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 KIF26BQ2KJY2 2108 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 LRRIQ4A6NIV6 560 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 CBX4O00257 560 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 SUV39H1O43463 412 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 BAG4O95429 457 aaKnown RBP7.91□□□□□ -1.14
COL9A1-209ENST00000489861 P4HBP07237 508 aaKnown RBP7.91□□□□□ -1.14
COL9A1-209ENST00000489861 HMGA1P17096 107 aaKnown RBP7.91□□□□□ -1.14
COL9A1-209ENST00000489861 CDC27P30260 824 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 MCM4P33991 863 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 ACTN2P35609 894 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 ADD1P35611 737 aaKnown RBP7.91□□□□□ -1.14
COL9A1-209ENST00000489861 HNF1BP35680 557 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 IFNAR2P48551 515 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 NLRP12P59046 1061 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 YWHAHQ04917 246 aaPredicted RBP7.91□□□□□ -1.14
COL9A1-209ENST00000489861 VAC14Q08AM6 782 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 USP4Q13107 963 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 ZNF268Q14587 947 aaPredicted RBP7.91□□□□□ -1.14
COL9A1-209ENST00000489861 ANKRD1Q15327 319 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 HSF5Q4G112 596 aaPredicted RBP7.91□□□□□ -1.14
COL9A1-209ENST00000489861 XKR4Q5GH76 650 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 HES3Q5TGS1 186 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 RUFY3Q7L099 469 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 OTUD6AQ7L8S5 288 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 MON1AQ86VX9 555 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 BLIDQ8IZY5 108 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 GIPC2Q8TF65 315 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 ERLEC1Q96DZ1 483 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 ZNF274Q96GC6 653 aaPredicted RBP7.91□□□□□ -1.14
COL9A1-209ENST00000489861 HIC2Q96JB3 615 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 FAM20AQ96MK3 541 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 TCEANC2Q96MN5 208 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 CCDC43Q96MW1 224 aaKnown RBP7.91□□□□□ -1.14
COL9A1-209ENST00000489861 GCNAQ96QF7 691 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 CYP2S1Q96SQ9 504 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.91□□□□□ -1.14
COL9A1-209ENST00000489861 POLR3FQ9H1D9 316 aaPredicted RBP7.91□□□□□ -1.14
COL9A1-209ENST00000489861 CD248Q9HCU0 757 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 GPRC5CQ9NQ84 441 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 PPP4R2Q9NY27 417 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 SNX14Q9Y5W7 946 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 SCN1AP35498 2009 aa7.91□□□□□ -1.14
COL9A1-209ENST00000489861 FBN3Q75N90 2809 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 CYP3A7-CYP3A51PA0A087WV96 503 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 A0A1W2PQF6 199 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 M0QZQ0 153 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms