RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 ANAPC7Q9UJX3 599 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 NOC2LQ9Y3T9 749 aaKnown RBP6.73□□□□□ -1.33
SF3A3-208ENST00000489537 TELO2Q9Y4R8 837 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 NUB1Q9Y5A7 615 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 TRPV2Q9Y5S1 764 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 WDR81Q562E7 1941 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 ZNFX1Q9P2E3 1918 aaKnown RBP6.72□□□□□ -1.33
SF3A3-208ENST00000489537 A0A0C4DFX4 3053 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 CARNS1A5YM72 827 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 HUS1O60921 280 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 HSF2BPO75031 334 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 RNF8O76064 485 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 HEXIM1O94992 359 aaKnown RBP6.72□□□□□ -1.33
SF3A3-208ENST00000489537 TJP3O95049 919 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 CAPN2P17655 700 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 CCND3P30281 292 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-208ENST00000489537 RPL9P32969 192 aaKnown RBP6.72□□□□□ -1.33
SF3A3-208ENST00000489537 CYP2C19P33261 490 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 PTPN7P35236 360 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 TNFSF9P41273 254 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 ASPAP45381 313 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 EIF3BP55884 814 aaKnown RBP6.72□□□□□ -1.33
SF3A3-208ENST00000489537 VSNL1P62760 191 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 MRPS6P82932 125 aaKnown RBP6.72□□□□□ -1.33
SF3A3-208ENST00000489537 DR1Q01658 176 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 SNX17Q15036 470 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 SLC10A6Q3KNW5 377 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 XKR4Q5GH76 650 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 FBXO47Q5MNV8 452 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 NAA35Q5VZE5 725 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 EEF1DP3Q658K8 133 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 JADE1Q6IE81 842 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 Q6ZVU0 165 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 ARCQ7LC44 396 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 MAP7D3Q8IWC1 876 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 KATNAL2Q8IYT4 538 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 TMEM86AQ8N2M4 240 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 C1orf127Q8N9H9 656 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 C12orf50Q8NA57 414 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-208ENST00000489537 NOA1Q8NC60 698 aaKnown RBP6.72□□□□□ -1.33
SF3A3-208ENST00000489537 ZSWIM2Q8NEG5 633 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 EXD1Q8NHP7 514 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 ADAM32Q8TC27 787 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 FAM71BQ8TC56 605 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 KAT2BQ92831 832 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 SLCO2A1Q92959 643 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 KAT5Q92993 513 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 CD101Q93033 1021 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 CYFIP2Q96F07 1278 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 PAWRQ96IZ0 340 aaKnown RBP6.72□□□□□ -1.33
SF3A3-208ENST00000489537 SNX27Q96L92 541 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 PCDHB18PQ96TA0 734 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 TRIM62Q9BVG3 475 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 FUT8Q9BYC5 575 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.72□□□□□ -1.33
SF3A3-208ENST00000489537 FAM49AQ9H0Q0 323 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-208ENST00000489537 MINDY3Q9H8M7 445 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 APOBEC3GQ9HC16 384 aaKnown RBP6.72□□□□□ -1.33
SF3A3-208ENST00000489537 OSGEPQ9NPF4 335 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 GDF3Q9NR23 364 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 ASNSD1Q9NWL6 643 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 GDAP2Q9NXN4 497 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 PCYOX1Q9UHG3 505 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 GTF2IRD1Q9UHL9 959 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 DNMT3LQ9UJW3 386 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 TFR2Q9UP52 801 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 AGAP1Q9UPQ3 857 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 PIN4Q9Y237 131 aaKnown RBP6.72□□□□□ -1.33
SF3A3-208ENST00000489537 GIT1Q9Y2X7 761 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 PLXNA1Q9UIW2 1896 aa6.72□□□□□ -1.33
SF3A3-208ENST00000489537 SIGLEC16A6NMB1 481 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 GOLGA8KD6RF30 607 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 PDE2AO00408 941 aaPredicted RBP6.71□□□□□ -1.34
SF3A3-208ENST00000489537 FSCN2O14926 492 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 ZNF185O15231 689 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 DDX3YO15523 660 aaKnown RBP6.71□□□□□ -1.34
SF3A3-208ENST00000489537 B4GALT5O43286 388 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 NCK2O43639 380 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 PHF2O75151 1096 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 PARNO95453 639 aaKnown RBP6.71□□□□□ -1.34
SF3A3-208ENST00000489537 NPTXRO95502 500 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 CST3P01034 146 aaPredicted RBP6.71□□□□□ -1.34
SF3A3-208ENST00000489537 ITGB3P05106 788 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 NFICP08651 508 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 KRT3P12035 628 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 COL6A1P12109 1028 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 CD58P19256 250 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 LRPAP1P30533 357 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 CXCR5P32302 372 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 PCK1P35558 622 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 TNNT3P45378 269 aaPredicted RBP6.71□□□□□ -1.34
SF3A3-208ENST00000489537 GABRB2P47870 512 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 LHX1P48742 406 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 AARSP49588 968 aaKnown RBP eCLIP6.71□□□□□ -1.34
SF3A3-208ENST00000489537 TAF6P49848 677 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 PEX5P50542 639 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 OSTNP61366 133 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 CACNB2Q08289 660 aaPredicted RBP6.71□□□□□ -1.34
SF3A3-208ENST00000489537 C2orf54Q08AI8 447 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 CALCOCO2Q13137 446 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms