RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 BPIFB4P59827 614 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 PABPC1LQ4VXU2 614 aaKnown RBP13.21□□□□□ -0.29
COL4A5-206ENST00000489230 KLHDC7AQ5VTJ3 777 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 TMEM270Q6UE05 265 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 OTOP3Q7RTS5 596 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 LUZP1Q86V48 1076 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 RNF135Q8IUD6 432 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 SCN4BQ8IWT1 228 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 PLCD3Q8N3E9 789 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 WHAMMQ8TF30 809 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 PSMG2Q969U7 264 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 ACSF2Q96CM8 615 aaPredicted RBP13.21□□□□□ -0.29
COL4A5-206ENST00000489230 SMARCD1Q96GM5 515 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 PCMTD1Q96MG8 357 aaPredicted RBP13.21□□□□□ -0.29
COL4A5-206ENST00000489230 B3GNT5Q9BYG0 378 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 UBXN6Q9BZV1 441 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 GPR88Q9GZN0 384 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 DPEP3Q9H4B8 488 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 RTN4Q9NQC3 1192 aaKnown RBP13.21□□□□□ -0.29
COL4A5-206ENST00000489230 COMMD8Q9NX08 183 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 UXTQ9UBK9 157 aaPredicted RBP13.21□□□□□ -0.29
COL4A5-206ENST00000489230 ZMYM5Q9UJ78 669 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 CNTN6Q9UQ52 1028 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 USTQ9Y2C2 406 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 YIPF1Q9Y548 306 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 SOBPA7XYQ1 873 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 MED7O43513 233 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 HCRTO43612 131 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 ATP1A3P13637 1013 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 ACO1P21399 889 aaKnown RBP13.2□□□□□ -0.3
COL4A5-206ENST00000489230 FSHRP23945 695 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 PPP3CCP48454 512 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 KCNMA1Q12791 1236 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 ZNF394Q53GI3 561 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 SGO2Q562F6 1265 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 ARHGAP17Q68EM7 881 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 PDZD4Q76G19 769 aaPredicted RBP13.2□□□□□ -0.3
COL4A5-206ENST00000489230 GRASPQ7Z6J2 395 aaPredicted RBP13.2□□□□□ -0.3
COL4A5-206ENST00000489230 FMNL3Q8IVF7 1028 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 ARHGEF19Q8IW93 802 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 UBR7Q8N806 425 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 SLC4A11Q8NBS3 891 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 EDAQ92838 391 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 ERGIC2Q96RQ1 377 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 ARID3AQ99856 593 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 CORO1BQ9BR76 489 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 STK33Q9BYT3 514 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 ASAH2Q9NR71 780 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 CEP72Q9P209 647 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 DNMT3BQ9UBC3 853 aaKnown RBP13.2□□□□□ -0.3
COL4A5-206ENST00000489230 DNAJC12Q9UKB3 198 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 NME7Q9Y5B8 376 aa13.2□□□□□ -0.3
COL4A5-206ENST00000489230 MTCL1Q9Y4B5 1905 aaKnown RBP13.19□□□□□ -0.3
COL4A5-206ENST00000489230 RTN3O95197 1032 aaPredicted RBP13.19□□□□□ -0.3
COL4A5-206ENST00000489230 FAM200BP0CF97 657 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 KRT5P13647 590 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 CD19P15391 556 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 PTPN5P54829 565 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 UBASH3AP57075 661 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 PTK2Q05397 1052 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 CNGA2Q16280 664 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 DDR2Q16832 855 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 SUGP1Q8IWZ8 645 aaKnown RBP13.19□□□□□ -0.3
COL4A5-206ENST00000489230 FUKQ8N0W3 1084 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 C12orf29Q8N999 325 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 ANKRD52Q8NB46 1076 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 NEK11Q8NG66 645 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 SLC2A14Q8TDB8 520 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 MYRFLQ96LU7 910 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 KREMEN1Q96MU8 473 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 TWNKQ96RR1 684 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 PRRX2Q99811 253 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 DUSP16Q9BY84 665 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 CRISPLD1Q9H336 500 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 CSNK1G1Q9HCP0 422 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 DMAP1Q9NPF5 467 aaPredicted RBP13.19□□□□□ -0.3
COL4A5-206ENST00000489230 HESX1Q9UBX0 185 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 MRPS23Q9Y3D9 190 aaKnown RBP13.19□□□□□ -0.3
COL4A5-206ENST00000489230 WDFY4Q6ZS81 3184 aa13.19□□□□□ -0.3
COL4A5-206ENST00000489230 CLUHO75153 1309 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 ZNF318Q5VUA4 2279 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 A0A1B0GTH6 734 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 A0A1W2PQC6 194 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 CBFA2T2O43439 604 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 AP1G2O75843 785 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 RHOP08100 348 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 UCHL3P15374 230 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 CDC25CP30307 473 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 USP8P40818 1118 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 EPHA5P54756 1037 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 FANCCQ00597 558 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 NR1I3Q14994 352 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 SYCP1Q15431 976 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 ARHGAP44Q17R89 818 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 DENND5BQ6ZUT9 1274 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 PAQR9Q6ZVX9 377 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 APTXQ7Z2E3 356 aaKnown RBP13.18□□□□□ -0.3
COL4A5-206ENST00000489230 FAM35AQ86V20 835 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 NUP93Q8N1F7 819 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 RBBP8NLQ8NC74 664 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms