RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ZNF687Q8N1G0 1237 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 MYCBPAPQ8TBZ2 947 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 BPIFB1Q8TDL5 484 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 MRPS31Q92665 395 aaKnown RBP14.96□□□□□ -0.01
VTI1A-206ENST00000489142 USP13Q92995 863 aaPredicted RBP14.96□□□□□ -0.01
VTI1A-206ENST00000489142 EEF2KMTQ96G04 330 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 SLC22A12Q96S37 553 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 ZNF518BQ9C0D4 1074 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 MMRN2Q9H8L6 949 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 TMEM30AQ9NV96 361 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 FRMD4BQ9Y2L6 1034 aa14.96□□□□□ -0.01
VTI1A-206ENST00000489142 C2orf78A6NCI8 922 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 GOLGA6L4A6NEF3 574 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 PRR23AA6NEV1 266 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 PROB1E7EW31 1015 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 F8VP50 259 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 AKAP3O75969 853 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 PTPN1P18031 435 aaKnown RBP14.95□□□□□ -0.02
VTI1A-206ENST00000489142 ANXA13P27216 316 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 ATICP31939 592 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 PIK3CAP42336 1068 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 MAGEA11P43364 429 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 NUCB2P80303 420 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 IFRD2Q12894 506 aaPredicted RBP14.95□□□□□ -0.02
VTI1A-206ENST00000489142 KCNB1Q14721 858 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 ZNF667Q5HYK9 610 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 TRIM68Q6AZZ1 485 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 TXNDC11Q6PKC3 985 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 TSSK4Q6SA08 328 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 MON1AQ86VX9 555 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 CELF5Q8N6W0 485 aaKnown RBP14.95□□□□□ -0.02
VTI1A-206ENST00000489142 B3GALNT2Q8NCR0 500 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 CLDN23Q96B33 292 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 TRMT2BQ96GJ1 504 aaKnown RBP14.95□□□□□ -0.02
VTI1A-206ENST00000489142 CYP2S1Q96SQ9 504 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 B3GNT5Q9BYG0 378 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 OSBPL6Q9BZF3 934 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 TRPV5Q9NQA5 729 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 UXTQ9UBK9 157 aaPredicted RBP14.95□□□□□ -0.02
VTI1A-206ENST00000489142 HMGXB4Q9UGU5 601 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 TRAF3IP3Q9Y228 551 aa14.95□□□□□ -0.02
VTI1A-206ENST00000489142 MRPS17Q9Y2R5 130 aaKnown RBP14.95□□□□□ -0.02
VTI1A-206ENST00000489142 MAN2B1O00754 1011 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 LAMTOR5O43504 91 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 STAU1O95793 577 aaKnown RBP14.94□□□□□ -0.02
VTI1A-206ENST00000489142 HLA-DRAP01903 254 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 DDX6P26196 483 aaKnown RBP eCLIP14.94□□□□□ -0.02
VTI1A-206ENST00000489142 GCLMP48507 274 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 VAMP7P51809 220 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 AP3M2P53677 418 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 CSTF1Q05048 431 aaKnown RBP14.94□□□□□ -0.02
VTI1A-206ENST00000489142 MTAPQ13126 283 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 MAPRE1Q15691 268 aaKnown RBP14.94□□□□□ -0.02
VTI1A-206ENST00000489142 ZACNQ401N2 412 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 ARHGAP29Q52LW3 1261 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 WDR44Q5JSH3 913 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 SV2AQ7L0J3 742 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 FAM186BQ8IYM0 893 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 GUF1Q8N442 669 aaKnown RBP14.94□□□□□ -0.02
VTI1A-206ENST00000489142 TMC2Q8TDI7 906 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 TMEM174Q8WUU8 243 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 NKD2Q969F2 451 aaPredicted RBP14.94□□□□□ -0.02
VTI1A-206ENST00000489142 MYRFLQ96LU7 910 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 NELL2Q99435 816 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 LMAN1LQ9HAT1 526 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 GKN1Q9NS71 199 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 RBM12Q9NTZ6 932 aaKnown RBP14.94□□□□□ -0.02
VTI1A-206ENST00000489142 TDP1Q9NUW8 608 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 OBP2AQ9NY56 170 aa14.94□□□□□ -0.02
VTI1A-206ENST00000489142 MYO16Q9Y6X6 1858 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 OTOL1A6NHN0 477 aaPredicted RBP14.93□□□□□ -0.02
VTI1A-206ENST00000489142 SPECC1L-ADORA2AF8WAN1 911 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 NCAM2O15394 837 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 KIF20AO95235 890 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 ARSAP15289 507 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 WEE1P30291 646 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 CTHP32929 405 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 PPP3CAQ08209 521 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 ADAM9Q13443 819 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 PON2Q15165 354 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 ZCWPW2Q504Y3 356 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 VSTM1Q6UX27 236 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 DENND5BQ6ZUT9 1274 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 ARL14EPQ8N8R7 260 aaPredicted RBP14.93□□□□□ -0.02
VTI1A-206ENST00000489142 ENGASEQ8NFI3 743 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 SPATA17Q96L03 361 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 MED10Q9BTT4 135 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 EBF3Q9H4W6 596 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 VRTNQ9H8Y1 702 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 CFAP54Q96N23 3096 aa14.93□□□□□ -0.02
VTI1A-206ENST00000489142 TRAV19A0A0A6YYK7 116 aa14.92□□□□□ -0.02
VTI1A-206ENST00000489142 TRIM66O15016 1216 aa14.92□□□□□ -0.02
VTI1A-206ENST00000489142 ABL1P00519 1130 aa14.92□□□□□ -0.02
VTI1A-206ENST00000489142 CKMP06732 381 aa14.92□□□□□ -0.02
VTI1A-206ENST00000489142 CCDC130P13994 396 aa14.92□□□□□ -0.02
VTI1A-206ENST00000489142 PRCPP42785 496 aa14.92□□□□□ -0.02
VTI1A-206ENST00000489142 ASPAP45381 313 aa14.92□□□□□ -0.02
VTI1A-206ENST00000489142 RPS9P46781 194 aaKnown RBP14.92□□□□□ -0.02
VTI1A-206ENST00000489142 FAM160A1Q05DH4 1040 aa14.92□□□□□ -0.02
VTI1A-206ENST00000489142 SGSM1Q2NKQ1 1148 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms