RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 GPD1P21695 349 aa4.58□□□□□ -1.68
RFC4-213ENST00000489028 KCNA3P22001 575 aa4.58□□□□□ -1.68
RFC4-213ENST00000489028 ADORA2AP29274 412 aa4.58□□□□□ -1.68
RFC4-213ENST00000489028 CCT8P50990 548 aa4.58□□□□□ -1.68
RFC4-213ENST00000489028 ATXN1P54253 815 aaKnown RBP4.58□□□□□ -1.68
RFC4-213ENST00000489028 C21orf58P58505 322 aa4.58□□□□□ -1.68
RFC4-213ENST00000489028 PLA1AQ53H76 456 aa4.58□□□□□ -1.68
RFC4-213ENST00000489028 ZDHHC24Q6UX98 284 aa4.58□□□□□ -1.68
RFC4-213ENST00000489028 ZNF551Q7Z340 670 aaPredicted RBP4.58□□□□□ -1.68
RFC4-213ENST00000489028 MPP5Q8N3R9 675 aa4.58□□□□□ -1.68
RFC4-213ENST00000489028 FAM204AQ9H8W3 233 aa4.58□□□□□ -1.68
RFC4-213ENST00000489028 ARHGEF3Q9NR81 526 aa4.58□□□□□ -1.68
RFC4-213ENST00000489028 DLL3Q9NYJ7 618 aa4.58□□□□□ -1.68
RFC4-213ENST00000489028 SERGEFQ9UGK8 458 aa4.58□□□□□ -1.68
RFC4-213ENST00000489028 FRMPD2Q68DX3 1309 aaPredicted RBP4.57□□□□□ -1.68
RFC4-213ENST00000489028 A1L4Q6 167 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 TRIM43BA6NCK2 446 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 WIPF3A6NGB9 483 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 GCOM1H8Y6P7 765 aaPredicted RBP4.57□□□□□ -1.68
RFC4-213ENST00000489028 PPM1GO15355 546 aaPredicted RBP4.57□□□□□ -1.68
RFC4-213ENST00000489028 TBC1D4O60343 1298 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 TLR5O60602 858 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 PROP1O75360 226 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 NXPH3O95157 252 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 ZBED1O96006 694 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 HRGP04196 525 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 CYP2C9P11712 490 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 LRPAP1P30533 357 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 DGKEP52429 567 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 KRT17Q04695 432 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 E2F2Q14209 437 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 CCDC142Q17RM4 750 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 LY6KQ17RY6 165 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 PTCHD3Q3KNS1 767 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 C3orf38Q5JPI3 329 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 TEDDM1Q5T9Z0 273 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 DEPDC1Q5TB30 811 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 RNF220Q5VTB9 566 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 SYCE2Q6PIF2 218 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 ZNF788Q6ZQV5 615 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 CCDC149Q6ZUS6 474 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 FMNL3Q8IVF7 1028 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 LRTOMTQ8WZ04 291 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 TRIM43Q96BQ3 446 aaPredicted RBP4.57□□□□□ -1.68
RFC4-213ENST00000489028 TIFAQ96CG3 184 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 R3HDM4Q96D70 268 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 SACM1LQ9NTJ5 587 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 SNX14Q9Y5W7 946 aa4.57□□□□□ -1.68
RFC4-213ENST00000489028 AOX1Q06278 1338 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 C1RP00736 705 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 BRAFP15056 766 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 ATF3P18847 181 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 PDE6CP51160 858 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 FMO1Q01740 532 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 RAB32Q13637 225 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 CNGA2Q16280 664 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 GFOD2Q3B7J2 385 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 PLAC9Q5JTB6 97 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 SESTD1Q86VW0 696 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 WDR75Q8IWA0 830 aaKnown RBP4.56□□□□□ -1.68
RFC4-213ENST00000489028 SLC15A3Q8IY34 581 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 BPIFB1Q8TDL5 484 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 TMEM171Q8WVE6 324 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 DPF1Q92782 380 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 REPS1Q96D71 796 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 ZNF518BQ9C0D4 1074 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 GLOD4Q9HC38 313 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 COL20A1Q9P218 1284 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 TPCN1Q9ULQ1 816 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 WNT6Q9Y6F9 365 aa4.56□□□□□ -1.68
RFC4-213ENST00000489028 MANSC4A6NHS7 340 aaPredicted RBP4.55□□□□□ -1.68
RFC4-213ENST00000489028 ISM1B1AKI9 464 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 HNRNPCP07910 306 aaKnown RBP eCLIP4.55□□□□□ -1.68
RFC4-213ENST00000489028 NHLRC4P0CG21 123 aaPredicted RBP4.55□□□□□ -1.68
RFC4-213ENST00000489028 XRCC6P12956 609 aaKnown RBP eCLIP4.55□□□□□ -1.68
RFC4-213ENST00000489028 MYF5P13349 255 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 IL1R1P14778 569 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 NDUFB7P17568 137 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 ENGP17813 658 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 RHCEP18577 417 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 CD38P28907 300 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 CYP2C18P33260 490 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 SOX10P56693 466 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 RPS16P62249 146 aaKnown RBP4.55□□□□□ -1.68
RFC4-213ENST00000489028 MRPS21P82921 87 aaKnown RBP4.55□□□□□ -1.68
RFC4-213ENST00000489028 RHDQ02161 417 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 TFF2Q03403 129 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 KIAA0753Q2KHM9 967 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 MGAT5BQ3V5L5 792 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 FAM153CQ494X1 144 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 KCTD20Q7Z5Y7 419 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 SRGAP1Q7Z6B7 1085 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 ABRAQ8N0Z2 381 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 SOCS4Q8WXH5 440 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 NELL1Q92832 810 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 VOPP1Q96AW1 172 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 NMD3Q96D46 503 aaKnown RBP4.55□□□□□ -1.68
RFC4-213ENST00000489028 APIPQ96GX9 242 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 SUCLG2Q96I99 432 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 MACROD1Q9BQ69 325 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms