RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 RENBPP51606 427 aa3.63□□□□□ -1.83
CCDC93-209ENST00000488908 L1TD1Q5T7N2 865 aaKnown RBP3.63□□□□□ -1.83
CCDC93-209ENST00000488908 FAM160B1Q5W0V3 765 aa3.63□□□□□ -1.83
CCDC93-209ENST00000488908 PGM2L1Q6PCE3 622 aa3.63□□□□□ -1.83
CCDC93-209ENST00000488908 LVRNQ6Q4G3 990 aa3.63□□□□□ -1.83
CCDC93-209ENST00000488908 Q6ZTC4 211 aa3.63□□□□□ -1.83
CCDC93-209ENST00000488908 FAM46DQ8NEK8 389 aa3.63□□□□□ -1.83
CCDC93-209ENST00000488908 R3HDM4Q96D70 268 aa3.63□□□□□ -1.83
CCDC93-209ENST00000488908 SLC46A1Q96NT5 459 aa3.63□□□□□ -1.83
CCDC93-209ENST00000488908 FYTTD1Q96QD9 318 aaKnown RBP3.63□□□□□ -1.83
CCDC93-209ENST00000488908 THAP7Q9BT49 309 aaPredicted RBP3.63□□□□□ -1.83
CCDC93-209ENST00000488908 EFHD1Q9BUP0 239 aa3.63□□□□□ -1.83
CCDC93-209ENST00000488908 C1orf43Q9BWL3 253 aa3.63□□□□□ -1.83
CCDC93-209ENST00000488908 MKS1Q9NXB0 559 aa3.63□□□□□ -1.83
CCDC93-209ENST00000488908 SSX2IPQ9Y2D8 614 aa3.63□□□□□ -1.83
CCDC93-209ENST00000488908 ERVV-2B6SEH9 535 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 TMEM232C9JQI7 657 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 FZD9O00144 591 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 ARIH2O95376 493 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 A1BGP04217 495 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 ATXN1LP0C7T5 689 aaKnown RBP3.62□□□□□ -1.83
CCDC93-209ENST00000488908 T-ENOLP0DO92 83 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 PXNP49023 591 aaPredicted RBP3.62□□□□□ -1.83
CCDC93-209ENST00000488908 FXR1P51114 621 aaKnown RBP eCLIP3.62□□□□□ -1.83
CCDC93-209ENST00000488908 KIF23Q02241 960 aaPredicted RBP3.62□□□□□ -1.83
CCDC93-209ENST00000488908 SRSF1Q07955 248 aaKnown RBP eCLIP3.62□□□□□ -1.83
CCDC93-209ENST00000488908 FAM187BQ17R55 369 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 ARHGAP40Q5TG30 622 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 USP43Q70EL4 1123 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 PIM3Q86V86 326 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 FAM90A1Q86YD7 464 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 C3orf20Q8ND61 904 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 TNPO1Q92973 898 aaKnown RBP3.62□□□□□ -1.83
CCDC93-209ENST00000488908 COA7Q96BR5 231 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 PPP1R10Q96QC0 940 aaKnown RBP3.62□□□□□ -1.83
CCDC93-209ENST00000488908 PTDSS2Q9BVG9 487 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 CIPCQ9C0C6 399 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 TTYH3Q9C0H2 523 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 POLHQ9Y253 713 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 ZMYM2Q9UBW7 1377 aa3.62□□□□□ -1.83
CCDC93-209ENST00000488908 TTC3P53804 2025 aa3.61□□□□□ -1.83
CCDC93-209ENST00000488908 EME2A4GXA9 379 aaPredicted RBP3.61□□□□□ -1.83
CCDC93-209ENST00000488908 KLHL33A6NCF5 533 aa3.61□□□□□ -1.83
CCDC93-209ENST00000488908 RNF8O76064 485 aa3.61□□□□□ -1.83
CCDC93-209ENST00000488908 TOMM40O96008 361 aa3.61□□□□□ -1.83
CCDC93-209ENST00000488908 PIM1P11309 404 aaPredicted RBP3.61□□□□□ -1.83
CCDC93-209ENST00000488908 PSG1P11464 419 aa3.61□□□□□ -1.83
CCDC93-209ENST00000488908 ALDH5A1P51649 535 aaPredicted RBP3.61□□□□□ -1.83
CCDC93-209ENST00000488908 ZNF91Q05481 1191 aa3.61□□□□□ -1.83
CCDC93-209ENST00000488908 LONRF3Q496Y0 759 aa3.61□□□□□ -1.83
CCDC93-209ENST00000488908 RGS7BPQ6MZT1 257 aaPredicted RBP3.61□□□□□ -1.83
CCDC93-209ENST00000488908 C18orf65Q6ZTR6 163 aa3.61□□□□□ -1.83
CCDC93-209ENST00000488908 CPA6Q8N4T0 437 aa3.61□□□□□ -1.83
CCDC93-209ENST00000488908 C1orf162Q8NEQ5 155 aaPredicted RBP3.61□□□□□ -1.83
CCDC93-209ENST00000488908 ADAMTS18Q8TE60 1221 aa3.61□□□□□ -1.83
CCDC93-209ENST00000488908 LENG8Q96PV6 779 aaPredicted RBP3.61□□□□□ -1.83
CCDC93-209ENST00000488908 SIGLEC11Q96RL6 698 aa3.61□□□□□ -1.83
CCDC93-209ENST00000488908 WDCPQ9H6R7 721 aa3.61□□□□□ -1.83
CCDC93-209ENST00000488908 HESX1Q9UBX0 185 aa3.61□□□□□ -1.83
CCDC93-209ENST00000488908 GABRQQ9UN88 632 aa3.61□□□□□ -1.83
CCDC93-209ENST00000488908 TCRBV5S1A1TA0A578 114 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 B4DGG1 531 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 BTBD19C9JJ37 291 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 GTPBP1O00178 669 aaKnown RBP3.6□□□□□ -1.83
CCDC93-209ENST00000488908 DCLK1O15075 740 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 ERC2O15083 957 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 PRKCBP05771 671 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 ME1P48163 572 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 LILRA4P59901 499 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 DSC2Q02487 901 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 E2F2Q14209 437 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 IQCB1Q15051 598 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 UBAP2Q5T6F2 1119 aaKnown RBP3.6□□□□□ -1.83
CCDC93-209ENST00000488908 PIP4P1Q86T03 277 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 ADHFE1Q8IWW8 467 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.6□□□□□ -1.83
CCDC93-209ENST00000488908 OSR1Q8TAX0 266 aaPredicted RBP3.6□□□□□ -1.83
CCDC93-209ENST00000488908 SOCS4Q8WXH5 440 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 TRMOQ9BU70 441 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 DPCDQ9BVM2 203 aaPredicted RBP3.6□□□□□ -1.83
CCDC93-209ENST00000488908 FAM234AQ9H0X4 552 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.6□□□□□ -1.83
CCDC93-209ENST00000488908 TXLNGQ9NUQ3 528 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 ICKQ9UPZ9 632 aa3.6□□□□□ -1.83
CCDC93-209ENST00000488908 XPOTO43592 962 aaKnown RBP3.59□□□□□ -1.83
CCDC93-209ENST00000488908 GCATO75600 419 aa3.59□□□□□ -1.83
CCDC93-209ENST00000488908 TGFB3P10600 412 aa3.59□□□□□ -1.83
CCDC93-209ENST00000488908 CYP19A1P11511 503 aaPredicted RBP3.59□□□□□ -1.83
CCDC93-209ENST00000488908 CNGA1P29973 690 aa3.59□□□□□ -1.83
CCDC93-209ENST00000488908 CDKN2AP42771 156 aaKnown RBP3.59□□□□□ -1.83
CCDC93-209ENST00000488908 MASP1P48740 699 aa3.59□□□□□ -1.83
CCDC93-209ENST00000488908 ID2Q02363 134 aa3.59□□□□□ -1.83
CCDC93-209ENST00000488908 UAP1L1Q3KQV9 507 aa3.59□□□□□ -1.83
CCDC93-209ENST00000488908 ZNF628Q5EBL2 1059 aa3.59□□□□□ -1.83
CCDC93-209ENST00000488908 DAB2IPQ5VWQ8 1189 aa3.59□□□□□ -1.83
CCDC93-209ENST00000488908 DEF8Q6ZN54 512 aa3.59□□□□□ -1.83
CCDC93-209ENST00000488908 SLC15A3Q8IY34 581 aa3.59□□□□□ -1.83
CCDC93-209ENST00000488908 ATL2Q8NHH9 583 aa3.59□□□□□ -1.83
CCDC93-209ENST00000488908 ZNF398Q8TD17 642 aa3.59□□□□□ -1.83
CCDC93-209ENST00000488908 CCDC17Q96LX7 622 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms