RNA–Protein interactions for RNA: ENST00000488687.5

PSME4-209, Transcript of proteasome activator subunit 4, humanhuman

TSL 2

Gene PSME4, Length 3,073 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-209ENST00000488687 MIS12Q9H081 205 aa6.5□□□□□ -1.37
PSME4-209ENST00000488687 CXCL16Q9H2A7 254 aa6.5□□□□□ -1.37
PSME4-209ENST00000488687 FAM124BQ9H5Z6 455 aaPredicted RBP6.5□□□□□ -1.37
PSME4-209ENST00000488687 PRM3Q9NNZ6 103 aa6.5□□□□□ -1.37
PSME4-209ENST00000488687 CNTN3Q9P232 1028 aa6.5□□□□□ -1.37
PSME4-209ENST00000488687 WDR35Q9P2L0 1181 aa6.5□□□□□ -1.37
PSME4-209ENST00000488687 FAM153AQ9UHL3 310 aa6.5□□□□□ -1.37
PSME4-209ENST00000488687 FEZ2Q9UHY8 353 aaPredicted RBP6.5□□□□□ -1.37
PSME4-209ENST00000488687 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.5□□□□□ -1.37
PSME4-209ENST00000488687 CDY2AQ9Y6F7 541 aa6.5□□□□□ -1.37
PSME4-209ENST00000488687 SMIM28A0A1B0GU29 152 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 TCRBV7S2A1N4TA0A589 114 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 A8MXQ7 604 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 OPA1O60313 960 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 KRT1P04264 644 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 RARAP10276 462 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 IBSPP21815 317 aaPredicted RBP6.49□□□□□ -1.37
PSME4-209ENST00000488687 COILP38432 576 aaPredicted RBP6.49□□□□□ -1.37
PSME4-209ENST00000488687 TAS2R40P59535 323 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 FOXK2Q01167 660 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 SP3Q02447 781 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 CACNB2Q08289 660 aaPredicted RBP6.49□□□□□ -1.37
PSME4-209ENST00000488687 INCA1Q0VD86 236 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 STILQ15468 1287 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 KCTD19Q17RG1 926 aaPredicted RBP6.49□□□□□ -1.37
PSME4-209ENST00000488687 PTPN20Q4JDL3 420 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 C9orf57Q5W0N0 161 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 ALS2CLQ60I27 953 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 JAMLQ86YT9 394 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 KATNAL2Q8IYT4 538 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 LRRC52Q8N7C0 313 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 PRELID2Q8N945 189 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 EIF1ADQ8N9N8 165 aaKnown RBP6.49□□□□□ -1.37
PSME4-209ENST00000488687 C1orf54Q8WWF1 131 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 RBM41Q96IZ5 413 aaKnown RBP6.49□□□□□ -1.37
PSME4-209ENST00000488687 CCDC114Q96M63 670 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 KLHL11Q9NVR0 708 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 HESX1Q9UBX0 185 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 GTF2IRD1Q9UHL9 959 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 TSPAN16Q9UKR8 245 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 NOD1Q9Y239 953 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 IPPQ9Y573 584 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 TRPV2Q9Y5S1 764 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 F8VP50 259 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 PPEF2O14830 753 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 FSCN2O14926 492 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 ECEL1O95672 775 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 RALAP11233 206 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 HOXB1P14653 301 aaPredicted RBP6.49□□□□□ -1.37
PSME4-209ENST00000488687 PNPLA4P41247 253 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 SNX16P57768 344 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 TRIM32Q13049 653 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 HADHQ16836 314 aaKnown RBP6.49□□□□□ -1.37
PSME4-209ENST00000488687 GOLGA7BQ2TAP0 167 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 FBXO47Q5MNV8 452 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 GDF6Q6KF10 455 aaPredicted RBP6.49□□□□□ -1.37
PSME4-209ENST00000488687 ACOT1Q86TX2 421 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 RCOR2Q8IZ40 523 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 EXD1Q8NHP7 514 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 GRK7Q8WTQ7 553 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 ITFG2Q969R8 447 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 TSPAN18Q96SJ8 248 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 CPXM1Q96SM3 734 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 MRPL45Q9BRJ2 306 aaKnown RBP6.49□□□□□ -1.37
PSME4-209ENST00000488687 UBXN6Q9BZV1 441 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 SNX25Q9H3E2 840 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 METTL5Q9NRN9 209 aaKnown RBP6.49□□□□□ -1.37
PSME4-209ENST00000488687 HOMER3Q9NSC5 361 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 PCYOX1Q9UHG3 505 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 ZMIZ1Q9ULJ6 1067 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 FAN1Q9Y2M0 1017 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 SNX24Q9Y343 169 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 TRIP11Q15643 1979 aa6.49□□□□□ -1.37
PSME4-209ENST00000488687 SIGLEC16A6NMB1 481 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 KPNA7A9QM74 516 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 O00370 1275 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 PIK3R2O00459 728 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 HUS1O60921 280 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 RNF40O75150 1001 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 ERBB2P04626 1255 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 ASGR1P07306 291 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 ELNP15502 786 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 DESP17661 470 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 HOXD10P28358 340 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 CCND3P30281 292 aaPredicted RBP6.48□□□□□ -1.37
PSME4-209ENST00000488687 GBP1P32455 592 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 RFC1P35251 1148 aaPredicted RBP6.48□□□□□ -1.37
PSME4-209ENST00000488687 THPOP40225 353 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 KCNJ1P48048 391 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 FNTAP49354 379 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 AARSP49588 968 aaKnown RBP eCLIP6.48□□□□□ -1.37
PSME4-209ENST00000488687 TAF6P49848 677 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 PLTPP55058 493 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 PDCLQ13371 301 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 ZNF268Q14587 947 aaPredicted RBP6.48□□□□□ -1.37
PSME4-209ENST00000488687 ZBTB6Q15916 424 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 SV2CQ496J9 727 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 FAM102AQ5T9C2 384 aaPredicted RBP6.48□□□□□ -1.37
PSME4-209ENST00000488687 DMRTA1Q5VZB9 504 aa6.48□□□□□ -1.37
PSME4-209ENST00000488687 KAZNQ674X7 775 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms