RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 BDNFP23560 247 aa24.15■■□□□ 1.46
PTPN4-211ENST00000488279 TNNC1P63316 161 aa24.15■■□□□ 1.46
PTPN4-211ENST00000488279 SATB1Q01826 763 aa24.15■■□□□ 1.46
PTPN4-211ENST00000488279 PSMD2Q13200 908 aa24.15■■□□□ 1.46
PTPN4-211ENST00000488279 SYNPOQ8N3V7 929 aa24.15■■□□□ 1.46
PTPN4-211ENST00000488279 OR6B3Q8NGW1 331 aa24.15■■□□□ 1.46
PTPN4-211ENST00000488279 SPATA17Q96L03 361 aa24.15■■□□□ 1.46
PTPN4-211ENST00000488279 CEP295NLQ96MC4 621 aa24.15■■□□□ 1.46
PTPN4-211ENST00000488279 MRPL45Q9BRJ2 306 aaKnown RBP24.15■■□□□ 1.46
PTPN4-211ENST00000488279 EBF3Q9H4W6 596 aa24.15■■□□□ 1.46
PTPN4-211ENST00000488279 FANCMQ8IYD8 2048 aa24.15■■□□□ 1.46
PTPN4-211ENST00000488279 TRAV19A0A0A6YYK7 116 aa24.14■■□□□ 1.45
PTPN4-211ENST00000488279 ACTN4O43707 911 aaKnown RBP24.14■■□□□ 1.45
PTPN4-211ENST00000488279 PHACTR2O75167 634 aa24.14■■□□□ 1.45
PTPN4-211ENST00000488279 TADA3O75528 432 aa24.14■■□□□ 1.45
PTPN4-211ENST00000488279 USP17L7P0C7H9 530 aa24.14■■□□□ 1.45
PTPN4-211ENST00000488279 CMA1P23946 247 aa24.14■■□□□ 1.45
PTPN4-211ENST00000488279 AMPD2Q01433 879 aa24.14■■□□□ 1.45
PTPN4-211ENST00000488279 STK4Q13043 487 aa24.14■■□□□ 1.45
PTPN4-211ENST00000488279 CCINQ13939 588 aa24.14■■□□□ 1.45
PTPN4-211ENST00000488279 WDR44Q5JSH3 913 aa24.14■■□□□ 1.45
PTPN4-211ENST00000488279 TRIM68Q6AZZ1 485 aa24.14■■□□□ 1.45
PTPN4-211ENST00000488279 PCED1BQ96HM7 432 aa24.14■■□□□ 1.45
PTPN4-211ENST00000488279 CYP2S1Q96SQ9 504 aa24.14■■□□□ 1.45
PTPN4-211ENST00000488279 EXOC1Q9NV70 894 aa24.14■■□□□ 1.45
PTPN4-211ENST00000488279 USP25Q9UHP3 1055 aa24.14■■□□□ 1.45
PTPN4-211ENST00000488279 SMG5Q9UPR3 1016 aaKnown RBP24.14■■□□□ 1.45
PTPN4-211ENST00000488279 NUP210Q8TEM1 1887 aaPredicted RBP24.13■■□□□ 1.45
PTPN4-211ENST00000488279 A0A1B0GVL5 298 aa24.13■■□□□ 1.45
PTPN4-211ENST00000488279 KLRC4O43908 158 aa24.13■■□□□ 1.45
PTPN4-211ENST00000488279 STAU1O95793 577 aaKnown RBP24.13■■□□□ 1.45
PTPN4-211ENST00000488279 CKMP06732 381 aa24.13■■□□□ 1.45
PTPN4-211ENST00000488279 ANXA13P27216 316 aa24.13■■□□□ 1.45
PTPN4-211ENST00000488279 ATICP31939 592 aa24.13■■□□□ 1.45
PTPN4-211ENST00000488279 FOXK2Q01167 660 aa24.13■■□□□ 1.45
PTPN4-211ENST00000488279 FAM160A1Q05DH4 1040 aa24.13■■□□□ 1.45
PTPN4-211ENST00000488279 PDGFRLQ15198 375 aa24.13■■□□□ 1.45
PTPN4-211ENST00000488279 DENND5BQ6ZUT9 1274 aa24.13■■□□□ 1.45
PTPN4-211ENST00000488279 SYAP1Q96A49 352 aaPredicted RBP24.13■■□□□ 1.45
PTPN4-211ENST00000488279 GZF1Q9H116 711 aaPredicted RBP24.13■■□□□ 1.45
PTPN4-211ENST00000488279 HPS4Q9NQG7 708 aa24.13■■□□□ 1.45
PTPN4-211ENST00000488279 EHD2Q9NZN4 543 aa24.13■■□□□ 1.45
PTPN4-211ENST00000488279 TRIM66O15016 1216 aa24.12■■□□□ 1.45
PTPN4-211ENST00000488279 PFKFB1P16118 471 aa24.12■■□□□ 1.45
PTPN4-211ENST00000488279 AP3M2P53677 418 aa24.12■■□□□ 1.45
PTPN4-211ENST00000488279 MYL6P60660 151 aa24.12■■□□□ 1.45
PTPN4-211ENST00000488279 GRSF1Q12849 480 aaKnown RBP eCLIP24.12■■□□□ 1.45
PTPN4-211ENST00000488279 KMT5BQ4FZB7 885 aa24.12■■□□□ 1.45
PTPN4-211ENST00000488279 MDH1BQ5I0G3 518 aa24.12■■□□□ 1.45
PTPN4-211ENST00000488279 Q6ZS52 159 aa24.12■■□□□ 1.45
PTPN4-211ENST00000488279 SPATA32Q96LK8 384 aa24.12■■□□□ 1.45
PTPN4-211ENST00000488279 SLC22A12Q96S37 553 aa24.12■■□□□ 1.45
PTPN4-211ENST00000488279 NXF1Q9UBU9 619 aaKnown RBP24.12■■□□□ 1.45
PTPN4-211ENST00000488279 OTOGLQ3ZCN5 2332 aa24.12■■□□□ 1.45
PTPN4-211ENST00000488279 OTOL1A6NHN0 477 aaPredicted RBP24.11■■□□□ 1.45
PTPN4-211ENST00000488279 PAPSS2O95340 614 aaPredicted RBP24.11■■□□□ 1.45
PTPN4-211ENST00000488279 MYL1P05976 194 aa24.11■■□□□ 1.45
PTPN4-211ENST00000488279 PTPN1P18031 435 aaKnown RBP24.11■■□□□ 1.45
PTPN4-211ENST00000488279 HDCP19113 662 aa24.11■■□□□ 1.45
PTPN4-211ENST00000488279 CASP4P49662 377 aa24.11■■□□□ 1.45
PTPN4-211ENST00000488279 PDE6CP51160 858 aa24.11■■□□□ 1.45
PTPN4-211ENST00000488279 KRT85P78386 507 aa24.11■■□□□ 1.45
PTPN4-211ENST00000488279 BIRC3Q13489 604 aa24.11■■□□□ 1.45
PTPN4-211ENST00000488279 MTF1Q14872 753 aa24.11■■□□□ 1.45
PTPN4-211ENST00000488279 GPR161Q8N6U8 529 aaKnown RBP24.11■■□□□ 1.45
PTPN4-211ENST00000488279 ARL14EPQ8N8R7 260 aaPredicted RBP24.11■■□□□ 1.45
PTPN4-211ENST00000488279 KIAA0895Q8NCT3 520 aa24.11■■□□□ 1.45
PTPN4-211ENST00000488279 TTC16Q8NEE8 873 aa24.11■■□□□ 1.45
PTPN4-211ENST00000488279 RIN3Q8TB24 985 aa24.11■■□□□ 1.45
PTPN4-211ENST00000488279 XYLT2Q9H1B5 865 aa24.11■■□□□ 1.45
PTPN4-211ENST00000488279 RAB23Q9ULC3 237 aa24.11■■□□□ 1.45
PTPN4-211ENST00000488279 GPR179Q6PRD1 2367 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 C2orf78A6NCI8 922 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 A8MXQ7 604 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 TRDMT1O14717 391 aaKnown RBP24.1■■□□□ 1.45
PTPN4-211ENST00000488279 ARSAP15289 507 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 KCNB1Q14721 858 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 TMEM196Q5HYL7 178 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 ERMP1Q7Z2K6 904 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 SLC9A9Q8IVB4 645 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 PARD3BQ8TEW8 1205 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 TMEM174Q8WUU8 243 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 OSCP1Q8WVF1 389 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 C8orf48Q96LL4 319 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 DMAC2Q9NW81 257 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 DUS2Q9NX74 493 aaKnown RBP24.1■■□□□ 1.45
PTPN4-211ENST00000488279 TRPM5Q9NZQ8 1165 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 GCNT4Q9P109 453 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 HPSEQ9Y251 543 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 NME7Q9Y5B8 376 aa24.1■■□□□ 1.45
PTPN4-211ENST00000488279 F8VP50 259 aa24.09■■□□□ 1.45
PTPN4-211ENST00000488279 NOP14P78316 857 aaKnown RBP24.09■■□□□ 1.45
PTPN4-211ENST00000488279 CLDN10P78369 228 aa24.09■■□□□ 1.45
PTPN4-211ENST00000488279 ZNF77Q15935 545 aa24.09■■□□□ 1.45
PTPN4-211ENST00000488279 TDRD10Q5VZ19 366 aaKnown RBP24.09■■□□□ 1.45
PTPN4-211ENST00000488279 PLEKHO2Q8TD55 490 aa24.09■■□□□ 1.45
PTPN4-211ENST00000488279 EXOC4Q96A65 974 aa24.09■■□□□ 1.45
PTPN4-211ENST00000488279 RMDN1Q96DB5 314 aa24.09■■□□□ 1.45
PTPN4-211ENST00000488279 DPEP3Q9H4B8 488 aa24.09■■□□□ 1.45
PTPN4-211ENST00000488279 VRTNQ9H8Y1 702 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms