RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 COL4A3BPQ9Y5P4 624 aa5.4□□□□□ -1.54
SMC4-219ENST00000487747 PPEF2O14830 753 aa5.39□□□□□ -1.55
SMC4-219ENST00000487747 BMP15O95972 392 aa5.39□□□□□ -1.55
SMC4-219ENST00000487747 NPSP0C0P6 89 aa5.39□□□□□ -1.55
SMC4-219ENST00000487747 MYO1EQ12965 1108 aa5.39□□□□□ -1.55
SMC4-219ENST00000487747 E2F2Q14209 437 aa5.39□□□□□ -1.55
SMC4-219ENST00000487747 ZNF267Q14586 743 aaPredicted RBP5.39□□□□□ -1.55
SMC4-219ENST00000487747 DAZAP2Q15038 168 aaPredicted RBP5.39□□□□□ -1.55
SMC4-219ENST00000487747 AMOTQ4VCS5 1084 aa5.39□□□□□ -1.55
SMC4-219ENST00000487747 KIRREL2Q6UWL6 708 aa5.39□□□□□ -1.55
SMC4-219ENST00000487747 CNGA4Q8IV77 575 aa5.39□□□□□ -1.55
SMC4-219ENST00000487747 GRAMD1CQ8IYS0 662 aa5.39□□□□□ -1.55
SMC4-219ENST00000487747 GALNT16Q8N428 558 aa5.39□□□□□ -1.55
SMC4-219ENST00000487747 HPS3Q969F9 1004 aa5.39□□□□□ -1.55
SMC4-219ENST00000487747 MRGPRX1Q96LB2 322 aa5.39□□□□□ -1.55
SMC4-219ENST00000487747 P2RX7Q99572 595 aaKnown RBP5.39□□□□□ -1.55
SMC4-219ENST00000487747 THAP7Q9BT49 309 aaPredicted RBP5.39□□□□□ -1.55
SMC4-219ENST00000487747 TBC1D30Q9Y2I9 924 aa5.39□□□□□ -1.55
SMC4-219ENST00000487747 EXOC3O60645 756 aa5.38□□□□□ -1.55
SMC4-219ENST00000487747 FPR3P25089 353 aa5.38□□□□□ -1.55
SMC4-219ENST00000487747 VIPR2P41587 438 aa5.38□□□□□ -1.55
SMC4-219ENST00000487747 SLC11A2P49281 568 aa5.38□□□□□ -1.55
SMC4-219ENST00000487747 CYP1B1Q16678 543 aa5.38□□□□□ -1.55
SMC4-219ENST00000487747 DPY19L3Q6ZPD9 716 aa5.38□□□□□ -1.55
SMC4-219ENST00000487747 RP9Q8TA86 221 aaKnown RBP5.38□□□□□ -1.55
SMC4-219ENST00000487747 CDK5RAP3Q96JB5 506 aa5.38□□□□□ -1.55
SMC4-219ENST00000487747 ZC3H10Q96K80 434 aaKnown RBP5.38□□□□□ -1.55
SMC4-219ENST00000487747 VPS16Q9H269 839 aa5.38□□□□□ -1.55
SMC4-219ENST00000487747 SARS2Q9NP81 518 aaKnown RBP5.38□□□□□ -1.55
SMC4-219ENST00000487747 ANLNQ9NQW6 1124 aa5.38□□□□□ -1.55
SMC4-219ENST00000487747 KLHL13Q9P2N7 655 aa5.38□□□□□ -1.55
SMC4-219ENST00000487747 IP6K2Q9UHH9 426 aa5.38□□□□□ -1.55
SMC4-219ENST00000487747 CCNL1Q9UK58 526 aaPredicted RBP5.38□□□□□ -1.55
SMC4-219ENST00000487747 GABRQQ9UN88 632 aa5.38□□□□□ -1.55
SMC4-219ENST00000487747 KCNAB3O43448 404 aa5.37□□□□□ -1.55
SMC4-219ENST00000487747 AKAP5P24588 427 aa5.37□□□□□ -1.55
SMC4-219ENST00000487747 GPSM2P81274 684 aa5.37□□□□□ -1.55
SMC4-219ENST00000487747 RABEP1Q15276 862 aa5.37□□□□□ -1.55
SMC4-219ENST00000487747 ATAT1Q5SQI0 421 aa5.37□□□□□ -1.55
SMC4-219ENST00000487747 L1TD1Q5T7N2 865 aaKnown RBP5.37□□□□□ -1.55
SMC4-219ENST00000487747 TECPR1Q7Z6L1 1165 aa5.37□□□□□ -1.55
SMC4-219ENST00000487747 ZBTB46Q86UZ6 589 aa5.37□□□□□ -1.55
SMC4-219ENST00000487747 SOCS4Q8WXH5 440 aa5.37□□□□□ -1.55
SMC4-219ENST00000487747 CHMP4CQ96CF2 233 aa5.37□□□□□ -1.55
SMC4-219ENST00000487747 NT5C1BQ96P26 610 aa5.37□□□□□ -1.55
SMC4-219ENST00000487747 MESP1Q9BRJ9 268 aa5.37□□□□□ -1.55
SMC4-219ENST00000487747 SLC12A5Q9H2X9 1139 aa5.37□□□□□ -1.55
SMC4-219ENST00000487747 HOMER2Q9NSB8 354 aa5.37□□□□□ -1.55
SMC4-219ENST00000487747 MED16Q9Y2X0 877 aa5.37□□□□□ -1.55
SMC4-219ENST00000487747 WDR17Q8IZU2 1322 aa5.37□□□□□ -1.55
SMC4-219ENST00000487747 CYP2D7A0A087X1C5 515 aa5.36□□□□□ -1.55
SMC4-219ENST00000487747 TJP3O95049 919 aa5.36□□□□□ -1.55
SMC4-219ENST00000487747 NTN1O95631 604 aa5.36□□□□□ -1.55
SMC4-219ENST00000487747 PF4V1P10720 104 aa5.36□□□□□ -1.55
SMC4-219ENST00000487747 CYP2A6P11509 494 aaPredicted RBP5.36□□□□□ -1.55
SMC4-219ENST00000487747 ALDH5A1P51649 535 aaPredicted RBP5.36□□□□□ -1.55
SMC4-219ENST00000487747 TPTEP56180 551 aa5.36□□□□□ -1.55
SMC4-219ENST00000487747 Q4G0T1 1027 aa5.36□□□□□ -1.55
SMC4-219ENST00000487747 RNASE12Q5GAN4 147 aaKnown RBP5.36□□□□□ -1.55
SMC4-219ENST00000487747 AWAT2Q6E213 333 aa5.36□□□□□ -1.55
SMC4-219ENST00000487747 COL23A1Q86Y22 540 aaPredicted RBP5.36□□□□□ -1.55
SMC4-219ENST00000487747 TERB1Q8NA31 727 aa5.36□□□□□ -1.55
SMC4-219ENST00000487747 ABHD11Q8NFV4 315 aa5.36□□□□□ -1.55
SMC4-219ENST00000487747 DAZAP1Q96EP5 407 aaKnown RBP5.36□□□□□ -1.55
SMC4-219ENST00000487747 MAP3K14Q99558 947 aa5.36□□□□□ -1.55
SMC4-219ENST00000487747 TCF7L1Q9HCS4 588 aa5.36□□□□□ -1.55
SMC4-219ENST00000487747 SHOC2Q9UQ13 582 aa5.36□□□□□ -1.55
SMC4-219ENST00000487747 STXBP5LQ9Y2K9 1186 aa5.36□□□□□ -1.55
SMC4-219ENST00000487747 TMX2Q9Y320 296 aa5.36□□□□□ -1.55
SMC4-219ENST00000487747 SNX14Q9Y5W7 946 aa5.36□□□□□ -1.55
SMC4-219ENST00000487747 TCRBV5S1A1TA0A578 114 aa5.35□□□□□ -1.55
SMC4-219ENST00000487747 AP4M1O00189 453 aa5.35□□□□□ -1.55
SMC4-219ENST00000487747 TRIM38O00635 465 aa5.35□□□□□ -1.55
SMC4-219ENST00000487747 BCAR3O75815 825 aa5.35□□□□□ -1.55
SMC4-219ENST00000487747 NR4A2P43354 598 aa5.35□□□□□ -1.55
SMC4-219ENST00000487747 MMP13P45452 471 aa5.35□□□□□ -1.55
SMC4-219ENST00000487747 PDE6CP51160 858 aa5.35□□□□□ -1.55
SMC4-219ENST00000487747 RENBPP51606 427 aa5.35□□□□□ -1.55
SMC4-219ENST00000487747 RAB1AP62820 205 aa5.35□□□□□ -1.55
SMC4-219ENST00000487747 E2F1Q01094 437 aa5.35□□□□□ -1.55
SMC4-219ENST00000487747 CAND1Q86VP6 1230 aaKnown RBP5.35□□□□□ -1.55
SMC4-219ENST00000487747 ABRAQ8N0Z2 381 aa5.35□□□□□ -1.55
SMC4-219ENST00000487747 TMEM171Q8WVE6 324 aa5.35□□□□□ -1.55
SMC4-219ENST00000487747 OSCP1Q8WVF1 389 aa5.35□□□□□ -1.55
SMC4-219ENST00000487747 HOOK2Q96ED9 719 aa5.35□□□□□ -1.55
SMC4-219ENST00000487747 KRTAP1-5Q9BYS1 174 aa5.35□□□□□ -1.55
SMC4-219ENST00000487747 CIPCQ9C0C6 399 aa5.35□□□□□ -1.55
SMC4-219ENST00000487747 H7C1Q1 480 aa5.34□□□□□ -1.55
SMC4-219ENST00000487747 KCNA3P22001 575 aa5.34□□□□□ -1.55
SMC4-219ENST00000487747 DGKEP52429 567 aa5.34□□□□□ -1.55
SMC4-219ENST00000487747 PTCHD3Q3KNS1 767 aa5.34□□□□□ -1.55
SMC4-219ENST00000487747 MIS18BP1Q6P0N0 1132 aa5.34□□□□□ -1.55
SMC4-219ENST00000487747 SLC15A3Q8IY34 581 aa5.34□□□□□ -1.55
SMC4-219ENST00000487747 SLC15A4Q8N697 577 aa5.34□□□□□ -1.55
SMC4-219ENST00000487747 DNAJC5GQ8N7S2 189 aa5.34□□□□□ -1.55
SMC4-219ENST00000487747 MOGAT1Q96PD6 335 aa5.34□□□□□ -1.55
SMC4-219ENST00000487747 SNX18Q96RF0 628 aa5.34□□□□□ -1.55
SMC4-219ENST00000487747 PRR25Q96S07 402 aa5.34□□□□□ -1.55
SMC4-219ENST00000487747 ASIC5Q9NY37 505 aa5.34□□□□□ -1.55
SMC4-219ENST00000487747 TUBA8Q9NY65 449 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms