RNA–Protein interactions for RNA: ENST00000486829.1

ARHGEF3-211, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-211ENST00000486829 ZNF606Q8WXB4 792 aa12.13□□□□□ -0.47
ARHGEF3-211ENST00000486829 PABPC5Q96DU9 382 aaKnown RBP12.13□□□□□ -0.47
ARHGEF3-211ENST00000486829 MED10Q9BTT4 135 aa12.13□□□□□ -0.47
ARHGEF3-211ENST00000486829 IGFLR1Q9H665 355 aa12.13□□□□□ -0.47
ARHGEF3-211ENST00000486829 ABHD10Q9NUJ1 306 aa12.13□□□□□ -0.47
ARHGEF3-211ENST00000486829 FAM49BQ9NUQ9 324 aa12.13□□□□□ -0.47
ARHGEF3-211ENST00000486829 CLDND1Q9NY35 253 aa12.13□□□□□ -0.47
ARHGEF3-211ENST00000486829 ABI2Q9NYB9 513 aaPredicted RBP12.13□□□□□ -0.47
ARHGEF3-211ENST00000486829 PCDHGC3Q9UN70 934 aa12.13□□□□□ -0.47
ARHGEF3-211ENST00000486829 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.13□□□□□ -0.47
ARHGEF3-211ENST00000486829 CEP83Q9Y592 693 aa12.13□□□□□ -0.47
ARHGEF3-211ENST00000486829 XIRP2A4UGR9 3374 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 PTPRDP23468 1912 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 PRRG1O14668 218 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 TRIM66O15016 1216 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 LINC01565O15544 149 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 LSM8O95777 96 aaKnown RBP12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 SERPING1P05155 500 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 SETSIPP0DME0 302 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 CCDC130P13994 396 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 NPR3P17342 541 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 BRD2P25440 801 aaKnown RBP12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 NRIP1P48552 1158 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 BCAT1P54687 386 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 RPL10AP62906 217 aaKnown RBP12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 CDR2Q01850 454 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 ARID5AQ03989 594 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 KLHL30Q0D2K2 578 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 LEXMQ3ZCV2 418 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 PPP1R26Q5T8A7 1209 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 PPP1R2P3Q6NXS1 205 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 IRF2BP2Q7Z5L9 587 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 PALB2Q86YC2 1186 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 EFHBQ8N7U6 833 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 KREMEN2Q8NCW0 462 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 CASP10Q92851 521 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 NECAB3Q96P71 396 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 PGLYRP2Q96PD5 576 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 DUSP16Q9BY84 665 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 B3GNT5Q9BYG0 378 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 PDCL3Q9H2J4 239 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 CYP4F11Q9HBI6 524 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 PNPLA8Q9NP80 782 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 DMAP1Q9NPF5 467 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 KRT82Q9NSB4 513 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 TMLHEQ9NVH6 421 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 DZANK1Q9NVP4 752 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 NOCTQ9UK39 431 aaKnown RBP12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 TSPAN16Q9UKR8 245 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 HCFC2Q9Y5Z7 792 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 A0A0C4DFX4 3053 aa12.12□□□□□ -0.47
ARHGEF3-211ENST00000486829 VCANP13611 3396 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 H3BQ06 376 aaPredicted RBP12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 M0QYV0 167 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 AP1G2O75843 785 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 HAPLN1P10915 354 aaPredicted RBP12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 ADORA2BP29275 332 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 HOXA9P31269 272 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 LTBRP36941 435 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 ADKP55263 362 aaKnown RBP12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 CDK17Q00537 523 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 DLX2Q07687 328 aaPredicted RBP12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 BST2Q10589 180 aaKnown RBP12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 DUSP4Q13115 394 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 CTC1Q2NKJ3 1217 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 GOLGA7BQ2TAP0 167 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 MGAT5BQ3V5L5 792 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 TDRD12Q587J7 1177 aaKnown RBP12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 TMEM184AQ6ZMB5 413 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 TRIM72Q6ZMU5 477 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 PAQR9Q6ZVX9 377 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 RBM23Q86U06 439 aaKnown RBP12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 NOP9Q86U38 636 aaKnown RBP12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 TC2NQ8N9U0 490 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 SPC24Q8NBT2 197 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 ATAD1Q8NBU5 361 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 SLC22A17Q8WUG5 538 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 TFAP2BQ92481 460 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 C8orf48Q96LL4 319 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 NOX5Q96PH1 765 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 PANX2Q96RD6 677 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 UHRF1Q96T88 793 aaPredicted RBP12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 SEPT5Q99719 369 aaPredicted RBP12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 UBXN6Q9BZV1 441 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 ZNF518BQ9C0D4 1074 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 LHX5Q9H2C1 402 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 CSNK1G1Q9HCP0 422 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 MAN1C1Q9NR34 630 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 EHD2Q9NZN4 543 aa12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 MTCL1Q9Y4B5 1905 aaKnown RBP12.11□□□□□ -0.47
ARHGEF3-211ENST00000486829 PER2O15055 1255 aa12.1□□□□□ -0.47
ARHGEF3-211ENST00000486829 MICAL2O94851 1124 aa12.1□□□□□ -0.47
ARHGEF3-211ENST00000486829 VNN2O95498 520 aa12.1□□□□□ -0.47
ARHGEF3-211ENST00000486829 C8AP07357 584 aa12.1□□□□□ -0.47
ARHGEF3-211ENST00000486829 POU2F2P09086 479 aa12.1□□□□□ -0.47
ARHGEF3-211ENST00000486829 HNRNPA1P09651 372 aaKnown RBP eCLIP12.1□□□□□ -0.47
ARHGEF3-211ENST00000486829 BDNFP23560 247 aa12.1□□□□□ -0.47
ARHGEF3-211ENST00000486829 CYP2F1P24903 491 aa12.1□□□□□ -0.47
ARHGEF3-211ENST00000486829 GRIK1P39086 918 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms