RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 TCP11X1B4DZS4 312 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 M0QYV0 167 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 ALOX15BO15296 676 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 SNX3O60493 162 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 OAS1P00973 400 aaKnown RBP18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 IFNB1P01574 187 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 HMGCRP04035 888 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 VDRP11473 427 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 GCAP28676 217 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 DYNLT1P63172 113 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 MYO1EQ12965 1108 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 NR1H3Q13133 447 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 FASTKD3Q14CZ7 662 aaKnown RBP18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 TMED2Q15363 201 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 GJC2Q5T442 439 aaPredicted RBP18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 CENPUQ71F23 418 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 HPDLQ96IR7 371 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 PPP1R16BQ96T49 567 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 ZNF408Q9H9D4 720 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 FARP1Q9Y4F1 1045 aaPredicted RBP18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 ARF4P18085 180 aaPredicted RBP18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 GPD2P43304 727 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 TMEM132DQ14C87 1099 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 MAMDC4Q6UXC1 1216 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 PPTC7Q8NI37 304 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 NKIRAS1Q9NYS0 192 aa18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 SAE1Q9UBE0 346 aaPredicted RBP18.88■□□□□ 0.61
PDLIM7-207ENST00000486828 RASA4BC9J798 803 aa18.87■□□□□ 0.61
PDLIM7-207ENST00000486828 RASA4O43374 803 aa18.87■□□□□ 0.61
PDLIM7-207ENST00000486828 RNF8O76064 485 aa18.87■□□□□ 0.61
PDLIM7-207ENST00000486828 VTNP04004 478 aa18.87■□□□□ 0.61
PDLIM7-207ENST00000486828 ZNF792Q3KQV3 632 aa18.87■□□□□ 0.61
PDLIM7-207ENST00000486828 PPP1R21Q6ZMI0 780 aa18.87■□□□□ 0.61
PDLIM7-207ENST00000486828 CMASQ8NFW8 434 aaPredicted RBP18.87■□□□□ 0.61
PDLIM7-207ENST00000486828 GDAP1Q8TB36 358 aa18.87■□□□□ 0.61
PDLIM7-207ENST00000486828 HEXIM2Q96MH2 286 aaKnown RBP18.87■□□□□ 0.61
PDLIM7-207ENST00000486828 PHACTR1Q9C0D0 580 aa18.87■□□□□ 0.61
PDLIM7-207ENST00000486828 MLXIPLQ9NP71 852 aa18.87■□□□□ 0.61
PDLIM7-207ENST00000486828 VTA1Q9NP79 307 aa18.87■□□□□ 0.61
PDLIM7-207ENST00000486828 ITGA11Q9UKX5 1188 aa18.87■□□□□ 0.61
PDLIM7-207ENST00000486828 AGAP1Q9UPQ3 857 aa18.87■□□□□ 0.61
PDLIM7-207ENST00000486828 RASSF9O75901 435 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 STAU1O95793 577 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 TRUB2O95900 331 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 CD48P09326 243 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 CHRM1P11229 460 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 MIPP30301 263 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 STX2P32856 288 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 PSMC4P43686 418 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 GDF10P55107 478 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 INCA1Q0VD86 236 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 TRABD2AQ86V40 505 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 SUGP1Q8IWZ8 645 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 PPIL6Q8IXY8 311 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 ZBED8Q8IZ13 594 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 KCTD6Q8NC69 237 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 GTF3C2Q8WUA4 911 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 EMID1Q96A84 441 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 ADPGKQ9BRR6 497 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 FAM124BQ9H5Z6 455 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 VPS37BQ9H9H4 285 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 PPCSQ9HAB8 311 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 UBN1Q9NPG3 1134 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 FGFR1OP2Q9NVK5 253 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 ASNSD1Q9NWL6 643 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 PCSK1NQ9UHG2 260 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 BARX2Q9UMQ3 279 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 C2CD2Q9Y426 696 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 RBM47A0AV96 593 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 DNAJC8O75937 253 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 CYP2C8P10632 490 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 GJA5P36382 358 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 CTCFP49711 727 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 MKRN3Q13064 507 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 PDIA2Q13087 525 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 SNAPC2Q13487 334 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 NUGGCQ68CJ6 796 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 MTHFD1LQ6UB35 978 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 AFG1LQ8WV93 481 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 SGSM3Q96HU1 749 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 MAGEB18Q96M61 343 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 SLC40A1Q9NP59 571 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 PNMA3Q9UL41 463 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 USP18Q9UMW8 372 aa18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 USP15Q9Y4E8 981 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-207ENST00000486828 APOC4-APOC2K7ER74 178 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 TSPAN1O60635 241 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 ATP2C2O75185 946 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 CELF2O95319 508 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 APOC2P02655 101 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 GSTA1P08263 222 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 ZNF286BP0CG31 522 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 PCK1P35558 622 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 RBP5P82980 135 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 SF3A3Q12874 501 aaKnown RBP eCLIP18.85■□□□□ 0.611e-6■■■■■ 45.3
PDLIM7-207ENST00000486828 RASA2Q15283 850 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 HIF1AQ16665 826 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 HP1BP3Q5SSJ5 553 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 FAM102AQ5T9C2 384 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 TRPM8Q7Z2W7 1104 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms