RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 PDXDC1Q6P996 788 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 CPLX2Q6PUV4 134 aaKnown RBP5.96□□□□□ -1.46
COPS3-209ENST00000486810 OLFML1Q6UWY5 402 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 TUBA1AQ71U36 451 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 RHOT1Q8IXI2 618 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 CMTR2Q8IYT2 770 aaKnown RBP5.96□□□□□ -1.46
COPS3-209ENST00000486810 OR8K1Q8NGG5 319 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 SUN5Q8TC36 379 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 ACMSDQ8TDX5 336 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 PARD3BQ8TEW8 1205 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 CASKIN2Q8WXE0 1202 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 JDP2Q8WYK2 163 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 N4BP2L2Q92802 583 aaPredicted RBP5.96□□□□□ -1.46
COPS3-209ENST00000486810 KAT5Q92993 513 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 SPAG5Q96R06 1193 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 SIN3AQ96ST3 1273 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 C7orf25Q9BPX7 421 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 SCAND2PQ9GZW5 306 aaPredicted RBP5.96□□□□□ -1.46
COPS3-209ENST00000486810 CSRNP2Q9H175 543 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 AS3MTQ9HBK9 375 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 TYW1Q9NV66 732 aaKnown RBP5.96□□□□□ -1.46
COPS3-209ENST00000486810 MRFAP1Q9Y605 127 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 MYBBP1AQ9BQG0 1328 aaKnown RBP5.96□□□□□ -1.46
COPS3-209ENST00000486810 DHX57Q6P158 1386 aaKnown RBP5.95□□□□□ -1.46
COPS3-209ENST00000486810 A0A1W2PRQ8 180 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 TARSL2A2RTX5 802 aaKnown RBP5.95□□□□□ -1.46
COPS3-209ENST00000486810 DRGXA6NNA5 263 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 ENO4A6NNW6 628 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 TRIM24O15164 1050 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 PRC1O43663 620 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 GPR32O75388 356 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 SNRPA1P09661 255 aaKnown RBP5.95□□□□□ -1.46
COPS3-209ENST00000486810 HSPA1AP0DMV8 641 aaKnown RBP5.95□□□□□ -1.46
COPS3-209ENST00000486810 HSPA1BP0DMV9 641 aaKnown RBP5.95□□□□□ -1.46
COPS3-209ENST00000486810 RAP2AP10114 183 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 DDCP20711 480 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 HOXC13P31276 330 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 CA8P35219 290 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 ADKP55263 362 aaKnown RBP5.95□□□□□ -1.46
COPS3-209ENST00000486810 RAP2BP61225 183 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 NUCB1Q02818 461 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 TUBA3CQ13748 450 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 KLHL40Q2TBA0 621 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 RABL6Q3YEC7 729 aaPredicted RBP5.95□□□□□ -1.46
COPS3-209ENST00000486810 CCDC14Q49A88 953 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 CCDC93Q567U6 631 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 ATXN7L2Q5T6C5 722 aaPredicted RBP5.95□□□□□ -1.46
COPS3-209ENST00000486810 ARMC3Q5W041 872 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 NAA16Q6N069 864 aaPredicted RBP5.95□□□□□ -1.46
COPS3-209ENST00000486810 EFCAB12Q6NXP0 572 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 TUBA3EQ6PEY2 450 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 SEM1Q6ZVN7 128 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 CCDC89Q8N998 374 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 CPT1CQ8TCG5 803 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 CUL5Q93034 780 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 CYFIP2Q96F07 1278 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 C8orf76Q96K31 380 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 NEK1Q96PY6 1258 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 ALS2CR12Q96Q35 445 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 FAM167BQ9BTA0 163 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 ZNF341Q9BYN7 854 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 TRIM4Q9C037 500 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 TNMDQ9H2S6 317 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 TMEM140Q9NV12 185 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 FBXO34Q9NWN3 711 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 TUBGCP4Q9UGJ1 667 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 POLG2Q9UHN1 485 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 CLCA2Q9UQC9 943 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 RUVBL1Q9Y265 456 aaKnown RBP5.95□□□□□ -1.46
COPS3-209ENST00000486810 PCDHB1Q9Y5F3 818 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 USP19O94966 1318 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 PTPRCP08575 1304 aa5.95□□□□□ -1.46
COPS3-209ENST00000486810 KTN1Q86UP2 1357 aaKnown RBP5.94□□□□□ -1.46
COPS3-209ENST00000486810 A0A0B4J203 849 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 GTPBP10A4D1E9 387 aaKnown RBP5.94□□□□□ -1.46
COPS3-209ENST00000486810 GOLGA6L4A6NEF3 574 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 GOLGA6L9A6NEM1 432 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 SPTLC2O15270 562 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 NEMFO60524 1076 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 RPS6KA4O75676 772 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 RNASEH2AO75792 299 aaKnown RBP5.94□□□□□ -1.46
COPS3-209ENST00000486810 PRSS23O95084 383 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 SCAF4O95104 1147 aaKnown RBP5.94□□□□□ -1.46
COPS3-209ENST00000486810 FERP16591 822 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 SLC6A2P23975 617 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 ACVRL1P37023 503 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 RECQLP46063 649 aaPredicted RBP5.94□□□□□ -1.46
COPS3-209ENST00000486810 FNTAP49354 379 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 FXR1P51114 621 aaKnown RBP eCLIP5.94□□□□□ -1.46
COPS3-209ENST00000486810 CHN2P52757 468 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 SLC16A1P53985 500 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 RNASE9P60153 205 aaKnown RBP5.94□□□□□ -1.46
COPS3-209ENST00000486810 DSC2Q02487 901 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 MCL1Q07820 350 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 PPIDQ08752 370 aaKnown RBP5.94□□□□□ -1.46
COPS3-209ENST00000486810 CUL4BQ13620 913 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 UBE4AQ14139 1066 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 CCDC57Q2TAC2 916 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 USH1GQ495M9 461 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 TMEM240Q5SV17 173 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms