RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 LIMS2Q7Z4I7 341 aa20.1■□□□□ 0.81
GMDS-205ENST00000486793 GPD1LQ8N335 351 aa20.1■□□□□ 0.81
GMDS-205ENST00000486793 OR5B17Q8NGF7 314 aa20.1■□□□□ 0.81
GMDS-205ENST00000486793 RPLP0P6Q8NHW5 317 aa20.1■□□□□ 0.81
GMDS-205ENST00000486793 DDX1Q92499 740 aaKnown RBP20.1■□□□□ 0.81
GMDS-205ENST00000486793 CD101Q93033 1021 aa20.1■□□□□ 0.81
GMDS-205ENST00000486793 EXOC4Q96A65 974 aa20.1■□□□□ 0.81
GMDS-205ENST00000486793 HPDLQ96IR7 371 aa20.1■□□□□ 0.81
GMDS-205ENST00000486793 ZC3H10Q96K80 434 aaKnown RBP20.1■□□□□ 0.81
GMDS-205ENST00000486793 SMOC1Q9H4F8 434 aa20.1■□□□□ 0.81
GMDS-205ENST00000486793 INTS13Q9NVM9 706 aa20.1■□□□□ 0.81
GMDS-205ENST00000486793 R3HCC1Q9Y3T6 440 aaKnown RBP20.1■□□□□ 0.81
GMDS-205ENST00000486793 PTPRJQ12913 1337 aa20.09■□□□□ 0.81
GMDS-205ENST00000486793 SDK1Q7Z5N4 2213 aa20.09■□□□□ 0.81
GMDS-205ENST00000486793 HDCP19113 662 aa20.09■□□□□ 0.81
GMDS-205ENST00000486793 SYT1P21579 422 aa20.09■□□□□ 0.81
GMDS-205ENST00000486793 MAGEA11P43364 429 aa20.09■□□□□ 0.81
GMDS-205ENST00000486793 MYO1EQ12965 1108 aa20.09■□□□□ 0.81
GMDS-205ENST00000486793 PLA2G2CQ5R387 149 aa20.09■□□□□ 0.81
GMDS-205ENST00000486793 SYT13Q7L8C5 426 aa20.09■□□□□ 0.81
GMDS-205ENST00000486793 FSIP1Q8NA03 581 aa20.09■□□□□ 0.81
GMDS-205ENST00000486793 SH3RF2Q8TEC5 729 aa20.09■□□□□ 0.81
GMDS-205ENST00000486793 ATP2A3Q93084 1043 aa20.09■□□□□ 0.81
GMDS-205ENST00000486793 ANKRD36BP1Q96IX9 119 aa20.09■□□□□ 0.81
GMDS-205ENST00000486793 MAGEC2Q9UBF1 373 aaPredicted RBP20.09■□□□□ 0.81
GMDS-205ENST00000486793 ZNF233A6NK53 670 aa20.08■□□□□ 0.81
GMDS-205ENST00000486793 DCLK1O15075 740 aa20.08■□□□□ 0.81
GMDS-205ENST00000486793 PDGFRBP09619 1106 aa20.08■□□□□ 0.81
GMDS-205ENST00000486793 PSMC1P62191 440 aaKnown RBP20.08■□□□□ 0.81
GMDS-205ENST00000486793 USP4Q13107 963 aa20.08■□□□□ 0.81
GMDS-205ENST00000486793 PSMD2Q13200 908 aa20.08■□□□□ 0.81
GMDS-205ENST00000486793 DMC1Q14565 340 aa20.08■□□□□ 0.81
GMDS-205ENST00000486793 SLC39A14Q15043 492 aa20.08■□□□□ 0.81
GMDS-205ENST00000486793 DUOXA2Q1HG44 320 aa20.08■□□□□ 0.81
GMDS-205ENST00000486793 PLK5Q496M5 336 aa20.08■□□□□ 0.81
GMDS-205ENST00000486793 C4orf50Q6ZRC1 276 aa20.08■□□□□ 0.81
GMDS-205ENST00000486793 CBWD2Q8IUF1 395 aa20.08■□□□□ 0.81
GMDS-205ENST00000486793 GLIS3Q8NEA6 775 aa20.08■□□□□ 0.81
GMDS-205ENST00000486793 KBTBD7Q8WVZ9 684 aa20.08■□□□□ 0.81
GMDS-205ENST00000486793 HPS3Q969F9 1004 aa20.08■□□□□ 0.81
GMDS-205ENST00000486793 SYT15Q9BQS2 421 aa20.08■□□□□ 0.81
GMDS-205ENST00000486793 PCDHGA5Q9Y5G8 931 aa20.08■□□□□ 0.81
GMDS-205ENST00000486793 TSC2P49815 1807 aa20.08■□□□□ 0.8
GMDS-205ENST00000486793 BDNFP23560 247 aa20.07■□□□□ 0.8
GMDS-205ENST00000486793 GRIK1P39086 918 aa20.07■□□□□ 0.8
GMDS-205ENST00000486793 MPLP40238 635 aa20.07■□□□□ 0.8
GMDS-205ENST00000486793 NR1H3Q13133 447 aa20.07■□□□□ 0.8
GMDS-205ENST00000486793 KCNB1Q14721 858 aa20.07■□□□□ 0.8
GMDS-205ENST00000486793 STPG1Q5TH74 334 aa20.07■□□□□ 0.8
GMDS-205ENST00000486793 CCDC65Q8IXS2 484 aa20.07■□□□□ 0.8
GMDS-205ENST00000486793 PDILTQ8N807 584 aa20.07■□□□□ 0.8
GMDS-205ENST00000486793 MYLPFQ96A32 169 aa20.07■□□□□ 0.8
GMDS-205ENST00000486793 SPATA17Q96L03 361 aa20.07■□□□□ 0.8
GMDS-205ENST00000486793 USP28Q96RU2 1077 aa20.07■□□□□ 0.8
GMDS-205ENST00000486793 DUSP15Q9H1R2 295 aaPredicted RBP20.07■□□□□ 0.8
GMDS-205ENST00000486793 CRTAC1Q9NQ79 661 aa20.07■□□□□ 0.8
GMDS-205ENST00000486793 EBF1Q9UH73 591 aa20.07■□□□□ 0.8
GMDS-205ENST00000486793 CDH9Q9ULB4 789 aa20.07■□□□□ 0.8
GMDS-205ENST00000486793 ARHGAP26Q9UNA1 814 aa20.07■□□□□ 0.8
GMDS-205ENST00000486793 KIAA0391O15091 583 aaKnown RBP20.06■□□□□ 0.8
GMDS-205ENST00000486793 APBB3O95704 486 aa20.06■□□□□ 0.8
GMDS-205ENST00000486793 TNNC2P02585 160 aa20.06■□□□□ 0.8
GMDS-205ENST00000486793 USP46P62068 366 aa20.06■□□□□ 0.8
GMDS-205ENST00000486793 ZXDBP98169 803 aa20.06■□□□□ 0.8
GMDS-205ENST00000486793 CYP27A1Q02318 531 aa20.06■□□□□ 0.8
GMDS-205ENST00000486793 N4BP2L1Q5TBK1 243 aaPredicted RBP20.06■□□□□ 0.8
GMDS-205ENST00000486793 VSTM1Q6UX27 236 aa20.06■□□□□ 0.8
GMDS-205ENST00000486793 NUP210Q8TEM1 1887 aaPredicted RBP20.06■□□□□ 0.8
GMDS-205ENST00000486793 CHAMP1Q96JM3 812 aa20.06■□□□□ 0.8
GMDS-205ENST00000486793 VPS45Q9NRW7 570 aa20.06■□□□□ 0.8
GMDS-205ENST00000486793 CNOT1A5YKK6 2376 aaKnown RBP20.06■□□□□ 0.8
GMDS-205ENST00000486793 TCF3P15923 654 aa20.05■□□□□ 0.8
GMDS-205ENST00000486793 WARSP23381 471 aaKnown RBP20.05■□□□□ 0.8
GMDS-205ENST00000486793 HOXD13P35453 343 aa20.05■□□□□ 0.8
GMDS-205ENST00000486793 SURF1Q15526 300 aa20.05■□□□□ 0.8
GMDS-205ENST00000486793 MAPRE1Q15691 268 aaKnown RBP20.05■□□□□ 0.8
GMDS-205ENST00000486793 TCEAL6Q6IPX3 200 aa20.05■□□□□ 0.8
GMDS-205ENST00000486793 DENND5BQ6ZUT9 1274 aa20.05■□□□□ 0.8
GMDS-205ENST00000486793 TCEAL3Q969E4 200 aa20.05■□□□□ 0.8
GMDS-205ENST00000486793 ACDQ96AP0 544 aa20.05■□□□□ 0.8
GMDS-205ENST00000486793 MMS19Q96T76 1030 aa20.05■□□□□ 0.8
GMDS-205ENST00000486793 HSPBP1Q9NZL4 362 aa20.05■□□□□ 0.8
GMDS-205ENST00000486793 TRPM5Q9NZQ8 1165 aa20.05■□□□□ 0.8
GMDS-205ENST00000486793 INVSQ9Y283 1065 aa20.05■□□□□ 0.8
GMDS-205ENST00000486793 MORC2Q9Y6X9 1032 aaPredicted RBP20.05■□□□□ 0.8
GMDS-205ENST00000486793 ANTXRLA6NF34 631 aa20.04■□□□□ 0.8
GMDS-205ENST00000486793 RHOBTB1O94844 696 aa20.04■□□□□ 0.8
GMDS-205ENST00000486793 CST3P01034 146 aaPredicted RBP20.04■□□□□ 0.8
GMDS-205ENST00000486793 DGKEP52429 567 aa20.04■□□□□ 0.8
GMDS-205ENST00000486793 ELF2Q15723 593 aa20.04■□□□□ 0.8
GMDS-205ENST00000486793 ST3GAL2Q16842 350 aa20.04■□□□□ 0.8
GMDS-205ENST00000486793 STXBP4Q6ZWJ1 553 aa20.04■□□□□ 0.8
GMDS-205ENST00000486793 TRAPPC11Q7Z392 1133 aa20.04■□□□□ 0.8
GMDS-205ENST00000486793 RDH13Q8NBN7 331 aa20.04■□□□□ 0.8
GMDS-205ENST00000486793 MYCBPAPQ8TBZ2 947 aa20.04■□□□□ 0.8
GMDS-205ENST00000486793 PCED1BQ96HM7 432 aa20.04■□□□□ 0.8
GMDS-205ENST00000486793 RNF38Q9H0F5 515 aa20.04■□□□□ 0.8
GMDS-205ENST00000486793 MTMR6Q9Y217 621 aa20.04■□□□□ 0.8
GMDS-205ENST00000486793 ZFHX4Q86UP3 3567 aa20.04■□□□□ 0.8
GMDS-205ENST00000486793 CEP295Q9C0D2 2601 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms