RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CHP1Q99653 195 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 HAUS4Q9H6D7 363 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 ENTPD7Q9NQZ7 604 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 FAM49BQ9NUQ9 324 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 FNIP2Q9P278 1114 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 CD207Q9UJ71 328 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 NOCTQ9UK39 431 aaKnown RBP13.57□□□□□ -0.24
HDAC6-229ENST00000486665 KIAA1257Q9ULG3 409 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 FAM50BQ9Y247 325 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 SSX2IPQ9Y2D8 614 aa13.57□□□□□ -0.24
HDAC6-229ENST00000486665 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-229ENST00000486665 THAP12O43422 761 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 NCK2O43639 380 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 SERPING1P05155 500 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 NRIP1P48552 1158 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 KLHL30Q0D2K2 578 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 SMC1AQ14683 1233 aaKnown RBP13.56□□□□□ -0.24
HDAC6-229ENST00000486665 CNGA2Q16280 664 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 MEA1Q16626 185 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 SGO2Q562F6 1265 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 ARHGAP17Q68EM7 881 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 RNF19BQ6ZMZ0 732 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 ZNF571Q7Z3V5 609 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-229ENST00000486665 RBM23Q86U06 439 aaKnown RBP13.56□□□□□ -0.24
HDAC6-229ENST00000486665 DCP1BQ8IZD4 617 aaKnown RBP13.56□□□□□ -0.24
HDAC6-229ENST00000486665 FUKQ8N0W3 1084 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 VN1R2Q8NFZ6 395 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 SLC2A14Q8TDB8 520 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 EPS8L1Q8TE68 723 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 MYLPFQ96A32 169 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 CYFIP2Q96F07 1278 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 PCED1BQ96HM7 432 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 PGLYRP2Q96PD5 576 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 PANX2Q96RD6 677 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 PHOX2BQ99453 314 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 AGPAT1Q99943 283 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 SYT11Q9BT88 431 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 OXCT2Q9BYC2 517 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-229ENST00000486665 NGRNQ9NPE2 291 aaKnown RBP13.56□□□□□ -0.24
HDAC6-229ENST00000486665 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.56□□□□□ -0.24
HDAC6-229ENST00000486665 ARHGAP20Q9P2F6 1191 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 IRAK3Q9Y616 596 aa13.56□□□□□ -0.24
HDAC6-229ENST00000486665 KMT2EQ8IZD2 1858 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 WDR27A2RRH5 827 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 O00370 1275 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 MICAL2O94851 1124 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 MMEP08473 750 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 CCDC172P0C7W6 258 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 ADORA2BP29275 332 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 NDUFV1P49821 464 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 FMO1Q01740 532 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 CDR2Q01850 454 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 ROR1Q01973 937 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 CYP27A1Q02318 531 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 CCDC173Q0VFZ6 552 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 GPR17Q13304 367 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 RAB33AQ14088 237 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 TSR1Q2NL82 804 aaKnown RBP13.55□□□□□ -0.24
HDAC6-229ENST00000486665 DENND1BQ6P3S1 775 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 LCLAT1Q6UWP7 414 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 PALB2Q86YC2 1186 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 EFHBQ8N7U6 833 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 ATAD1Q8NBU5 361 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 UBA3Q8TBC4 463 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 PCDHB18PQ96TA0 734 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 HNRNPABQ99729 332 aaKnown RBP13.55□□□□□ -0.24
HDAC6-229ENST00000486665 MED10Q9BTT4 135 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 RHOBTB2Q9BYZ6 727 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 ZNF518BQ9C0D4 1074 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 CRISPLD1Q9H336 500 aa13.55□□□□□ -0.24
HDAC6-229ENST00000486665 ZNHIT6Q9NWK9 470 aaKnown RBP13.55□□□□□ -0.24
HDAC6-229ENST00000486665 MTMR11A4FU01 709 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 GOLGA6L6A8MZA4 724 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 PER2O15055 1255 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 ABLIM3O94929 683 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 CPB1P15086 417 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 FECHP22830 423 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 CYP2F1P24903 491 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 EIF4A3P38919 411 aaKnown RBP13.54□□□□□ -0.24
HDAC6-229ENST00000486665 PDE6CP51160 858 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 CACNA2D1P54289 1103 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 GSDMDP57764 484 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 BMS1Q14692 1282 aaKnown RBP13.54□□□□□ -0.24
HDAC6-229ENST00000486665 GOLGA7BQ2TAP0 167 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 PDE12Q6L8Q7 609 aaKnown RBP13.54□□□□□ -0.24
HDAC6-229ENST00000486665 TTC30AQ86WT1 665 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 TMEM139Q8IV31 216 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 FMNL3Q8IVF7 1028 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 WDTC1Q8N5D0 677 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 SMRP1Q8NCR6 262 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 EMILIN2Q9BXX0 1053 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 DNAI2Q9GZS0 605 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 TMEM30AQ9NV96 361 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 TSPAN16Q9UKR8 245 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.54□□□□□ -0.24
HDAC6-229ENST00000486665 SLC27A5Q9Y2P5 690 aa13.54□□□□□ -0.24
HDAC6-229ENST00000486665 FAM170AA1A519 330 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 LOC730098B7Z3J9 87 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 DDX3XO00571 662 aaKnown RBP eCLIP13.53□□□□□ -0.24
HDAC6-229ENST00000486665 MED7O43513 233 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms