RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 YWHAHQ04917 246 aaPredicted RBP8.99□□□□□ -0.97
XRN1-212ENST00000486211 MESP2Q0VG99 397 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 SCRN1Q12765 414 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 BFSP1Q12934 665 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 GRIK2Q13002 908 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 NNTQ13423 1086 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 BYSLQ13895 437 aaKnown RBP8.99□□□□□ -0.97
XRN1-212ENST00000486211 ZNF268Q14587 947 aaPredicted RBP8.99□□□□□ -0.97
XRN1-212ENST00000486211 MTF1Q14872 753 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 ZNF77Q15935 545 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 PLEKHG6Q3KR16 790 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 COLEC12Q5KU26 742 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 NT5DC1Q5TFE4 455 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 CC2D1AQ6P1N0 951 aaPredicted RBP8.99□□□□□ -0.97
XRN1-212ENST00000486211 DBX2Q6ZNG2 339 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 LRRC69Q6ZNQ3 347 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 ZBTB8OSQ8IWT0 167 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 TPH2Q8IWU9 490 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 TMEM130Q8N3G9 435 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 ALLCQ8N6M5 410 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 MAB21L3Q8N8X9 362 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 TXNDC5Q8NBS9 432 aaKnown RBP8.99□□□□□ -0.97
XRN1-212ENST00000486211 HMGB4Q8WW32 186 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 TSC1Q92574 1164 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 WBP1Q96G27 269 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 OXCT2Q9BYC2 517 aaPredicted RBP8.99□□□□□ -0.97
XRN1-212ENST00000486211 C22orf23Q9BZE7 217 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 LSG1Q9H089 658 aaKnown RBP8.99□□□□□ -0.97
XRN1-212ENST00000486211 SLKQ9H2G2 1235 aaPredicted RBP8.99□□□□□ -0.97
XRN1-212ENST00000486211 ANKEF1Q9NU02 776 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 HSFX1Q9UBD0 423 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 TIMM13Q9Y5L4 95 aaPredicted RBP8.99□□□□□ -0.97
XRN1-212ENST00000486211 WNT6Q9Y6F9 365 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 OBSL1O75147 1896 aa8.99□□□□□ -0.97
XRN1-212ENST00000486211 TEP1Q99973 2627 aaKnown RBP8.99□□□□□ -0.97
XRN1-212ENST00000486211 COL12A1Q99715 3063 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 OR6C75A6NL08 312 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 PLK4O00444 970 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 USO1O60763 962 aaKnown RBP8.98□□□□□ -0.97
XRN1-212ENST00000486211 KLF8O95600 359 aaPredicted RBP8.98□□□□□ -0.97
XRN1-212ENST00000486211 F11P03951 625 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 HLA-EP13747 358 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 NMT1P30419 496 aaKnown RBP8.98□□□□□ -0.97
XRN1-212ENST00000486211 GRM5P41594 1212 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 AARSP49588 968 aaKnown RBP eCLIP8.98□□□□□ -0.97
XRN1-212ENST00000486211 CSRP3P50461 194 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 NLRP12P59046 1061 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 TLE3Q04726 772 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 USP4Q13107 963 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 NECTIN1Q15223 517 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 NPY5RQ15761 445 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 NTRK3Q16288 839 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 TMEM132AQ24JP5 1023 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 TTC22Q5TAA0 569 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 CREB3L3Q68CJ9 461 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 TXNDC8Q6A555 127 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 NCAPH2Q6IBW4 605 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 SLC36A4Q6YBV0 504 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 SETD7Q8WTS6 366 aaKnown RBP8.98□□□□□ -0.97
XRN1-212ENST00000486211 ATP2A3Q93084 1043 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 HSPA12BQ96MM6 686 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 GCNAQ96QF7 691 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 KIF2CQ99661 725 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 HSD17B14Q9BPX1 270 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 C2orf40Q9H1Z8 148 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 PRDM16Q9HAZ2 1276 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 IL21RQ9HBE5 538 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 DUS2Q9NX74 493 aaKnown RBP8.98□□□□□ -0.97
XRN1-212ENST00000486211 CNTN3Q9P232 1028 aa8.98□□□□□ -0.97
XRN1-212ENST00000486211 BCCIPQ9P287 314 aaKnown RBP eCLIP8.98□□□□□ -0.97
XRN1-212ENST00000486211 A0A087WWV3 80 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 IGHV1OR15-9A0A0B4J2B8 117 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 TCRBV21S2A2A0A5A6 115 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 ZNF883P0CG24 379 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 C6P13671 934 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 HMGA1P17096 107 aaKnown RBP8.97□□□□□ -0.97
XRN1-212ENST00000486211 DDX6P26196 483 aaKnown RBP eCLIP8.97□□□□□ -0.97
XRN1-212ENST00000486211 MARCKSP29966 332 aaPredicted RBP8.97□□□□□ -0.97
XRN1-212ENST00000486211 KIR2DL1P43626 348 aaPredicted RBP8.97□□□□□ -0.97
XRN1-212ENST00000486211 MYBPC2Q14324 1141 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 INF2Q27J81 1249 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 HSF5Q4G112 596 aaPredicted RBP8.97□□□□□ -0.97
XRN1-212ENST00000486211 TAF1BQ53T94 588 aaPredicted RBP8.97□□□□□ -0.97
XRN1-212ENST00000486211 ATF7IP2Q5U623 682 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 EMC10Q5UCC4 262 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 MAEAQ7L5Y9 396 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 MON1AQ86VX9 555 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 EFCAB13Q8IY85 973 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 TRIML1Q8N9V2 468 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 NXPE2Q96DL1 559 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 ZNF419Q96HQ0 510 aaPredicted RBP8.97□□□□□ -0.97
XRN1-212ENST00000486211 CDC6Q99741 560 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 ZDHHC5Q9C0B5 715 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 CDT1Q9H211 546 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 LINC00597Q9H2U6 94 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 SH3GLB2Q9NR46 395 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 TOPORSQ9NS56 1045 aaPredicted RBP8.97□□□□□ -0.97
XRN1-212ENST00000486211 CALCOCO1Q9P1Z2 691 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 PCDHA4Q9UN74 947 aa8.97□□□□□ -0.97
XRN1-212ENST00000486211 FNDC3AQ9Y2H6 1198 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms