RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 NSUN2Q08J23 767 aaKnown RBP eCLIP4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 FAPQ12884 760 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 CDC16Q13042 620 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 IKQ13123 557 aaPredicted RBP4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 SMAD4Q13485 552 aaKnown RBP4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 SPARCL1Q14515 664 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 DHCR24Q15392 516 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 TUBB8Q3ZCM7 444 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 FNDC3BQ53EP0 1204 aaKnown RBP4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 GPATCH4Q5T3I0 446 aaKnown RBP4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 CPZQ66K79 652 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 DENND5AQ6IQ26 1287 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 LHFPL2Q6ZUX7 228 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 CEP68Q76N32 757 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 COPS6Q7L5N1 327 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 EPM2AIP1Q7L775 607 aaPredicted RBP4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 SLC9B2Q86UD5 537 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 TBC1D21Q8IYX1 336 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 NETO2Q8NC67 525 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 NSUN7Q8NE18 718 aaKnown RBP4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 ENGASEQ8NFI3 743 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 OR52K2Q8NGK3 314 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 FBXO30Q8TB52 745 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 SUN5Q8TC36 379 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 RAPGEF4Q8WZA2 1011 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 NACC2Q96BF6 587 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 TSPAN17Q96FV3 270 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 PEX11GQ96HA9 241 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 SGCZQ96LD1 299 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 UBXN10Q96LJ8 280 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 TIGD1Q96MW7 591 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 FAM193BQ96PV7 902 aaPredicted RBP4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 ASB2Q96Q27 587 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 MMP19Q99542 508 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 BPIFA3Q9BQP9 254 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 ALG1Q9BT22 464 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 DHRS4Q9BTZ2 278 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 TNMDQ9H2S6 317 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 TCF7L1Q9HCS4 588 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 DACT1Q9NYF0 836 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 CEP72Q9P209 647 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 LAMP5Q9UJQ1 280 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 MTUS1Q9ULD2 1270 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 PYCARDQ9ULZ3 195 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 GPR34Q9UPC5 381 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 NOSIPQ9Y314 301 aaKnown RBP4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 ZNF609O15014 1411 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 MEGF6O75095 1541 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 TNS2Q63HR2 1409 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 TRBV23OR9-2A0A075B6M9 112 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 GOLGA6L4A6NEF3 574 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 HNRNPCL2B2RXH8 293 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 B4E171 279 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 EYA2O00167 538 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 PLD2O14939 933 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 SPTLC2O15270 562 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 FRS3O43559 492 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 HNRNPCL1O60812 293 aaKnown RBP4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 DDHD2O94830 711 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 TGDSO95455 350 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 FSHBP01225 129 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 ZFYP08048 801 aaPredicted RBP4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 PARP1P09874 1014 aaKnown RBP4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 HSPA6P17066 643 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 LPOP22079 712 aaPredicted RBP4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 ATP5DP30049 168 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 HNF4AP41235 474 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 ZNF143P52747 638 aaPredicted RBP4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 TNFAIP2Q03169 654 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 TFCP2Q12800 502 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 IFIT5Q13325 482 aaKnown RBP4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 SCARB2Q14108 478 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 PPP1R7Q15435 360 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 CDSNQ15517 529 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 STX1AQ16623 288 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 ANO6Q4KMQ2 910 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 GPR139Q6DWJ6 353 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 ARHGEF18Q6ZSZ5 1173 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 NEK10Q6ZWH5 1172 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 ATG9AQ7Z3C6 839 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 CCDC186Q7Z3E2 898 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 KRT28Q7Z3Y7 464 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 UNC45BQ8IWX7 931 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 LRRC43Q8N309 656 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 PDCL2Q8N4E4 241 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 CRACR2BQ8N4Y2 399 aaPredicted RBP4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 PCYOX1LQ8NBM8 494 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 KREMEN2Q8NCW0 462 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 DEPTORQ8TB45 409 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 UTP15Q8TED0 518 aaKnown RBP4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 DIS3LQ8TF46 1054 aaKnown RBP4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 KCTD13Q8WZ19 329 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 CENPIQ92674 756 aaPredicted RBP4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 USP7Q93009 1102 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 BICD1Q96G01 975 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 CCDC43Q96MW1 224 aaKnown RBP4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 C8orf49Q96NF6 230 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 AIFM3Q96NN9 605 aa4.33□□□□□ -1.72
PRPF38B-205ENST00000485810 NT5C1BQ96P26 610 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms