RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 PRPF40AO75400 957 aaKnown RBP11.37□□□□□ -0.59
HMGN1-215ENST00000485550 LDHAP00338 332 aaKnown RBP11.37□□□□□ -0.59
HMGN1-215ENST00000485550 HAPLN1P10915 354 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-215ENST00000485550 GARTP22102 1010 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 ACAT1P24752 427 aaKnown RBP11.37□□□□□ -0.59
HMGN1-215ENST00000485550 NASPP49321 788 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-215ENST00000485550 POU5F1Q01860 360 aaKnown RBP11.37□□□□□ -0.59
HMGN1-215ENST00000485550 RING1Q06587 406 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 TNK2Q07912 1038 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 FCHO2Q0JRZ9 810 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 BFSP1Q12934 665 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 VEPH1Q14D04 833 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 ARHGAP15Q53QZ3 475 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 SH3PXD2AQ5TCZ1 1133 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 LRSAM1Q6UWE0 723 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 NT5DC4Q86YG4 428 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 DCP1BQ8IZD4 617 aaKnown RBP11.37□□□□□ -0.59
HMGN1-215ENST00000485550 PDCL2Q8N4E4 241 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 LINC00301Q8NCQ3 95 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 SPPL2BQ8TCT7 592 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 CACTINQ8WUQ7 758 aaKnown RBP11.37□□□□□ -0.59
HMGN1-215ENST00000485550 ZCCHC14Q8WYQ9 949 aaKnown RBP11.37□□□□□ -0.59
HMGN1-215ENST00000485550 E2F7Q96AV8 911 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 ZNF560Q96MR9 790 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 SCNM1Q9BWG6 230 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 SLC46A2Q9BY10 475 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 TASP1Q9H6P5 420 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 IL21Q9HBE4 155 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 OLFML3Q9NRN5 406 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 VPS45Q9NRW7 570 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 RYDENQ9NUL5 291 aaKnown RBP11.37□□□□□ -0.59
HMGN1-215ENST00000485550 L1RE1Q9UN81 338 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 MAGED2Q9UNF1 606 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-215ENST00000485550 LHX6Q9UPM6 363 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 WASF3Q9UPY6 502 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 PCDHB5Q9Y5E4 795 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 PCDHGA5Q9Y5G8 931 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 DMXL2Q8TDJ6 3036 aa11.37□□□□□ -0.59
HMGN1-215ENST00000485550 MYO18AQ92614 2054 aaKnown RBP11.37□□□□□ -0.59
HMGN1-215ENST00000485550 NBEAQ8NFP9 2946 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 FRMD3A2A2Y4 597 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 SOBPA7XYQ1 873 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 HCRTO43612 131 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 HUS1O60921 280 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 PRAMEF12O95522 483 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 TSPY1Q01534 308 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 CREB5Q02930 508 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 DDR2Q16832 855 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 CCDC142Q17RM4 750 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 PLK5Q496M5 336 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 CCDC65Q8IXS2 484 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 GPD1LQ8N335 351 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 SYNPOQ8N3V7 929 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 GATA6Q92908 595 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 DHX58Q96C10 678 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 GCNAQ96QF7 691 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 MTMR12Q9C0I1 747 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 DUSP15Q9H1R2 295 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-215ENST00000485550 TMEM206Q9H813 350 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 DDX43Q9NXZ2 648 aaKnown RBP11.36□□□□□ -0.59
HMGN1-215ENST00000485550 HSFX1Q9UBD0 423 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 SLC8A2Q9UPR5 921 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 SNX9Q9Y5X1 595 aa11.36□□□□□ -0.59
HMGN1-215ENST00000485550 TNRC6BQ9UPQ9 1833 aaKnown RBP11.36□□□□□ -0.59
HMGN1-215ENST00000485550 TMEM8BA6NDV4 472 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 DCLK1O15075 740 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 FGF19O95750 216 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 TMEM191BP0C7N4 346 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 HMGA1P17096 107 aaKnown RBP11.35□□□□□ -0.59
HMGN1-215ENST00000485550 CYP2F1P24903 491 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 CDC25CP30307 473 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 PNPLA4P41247 253 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 RBP5P82980 135 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 SMARCB1Q12824 385 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 ALCAMQ13740 583 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 ARHGAP29Q52LW3 1261 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 TXNDC8Q6A555 127 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 KIAA1211LQ6NV74 962 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 OSTM1Q86WC4 334 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 CBWD2Q8IUF1 395 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 MAB21L3Q8N8X9 362 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 RDH13Q8NBN7 331 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 TTC16Q8NEE8 873 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 OR5B17Q8NGF7 314 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 CXorf38Q8TB03 319 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 BPIFB1Q8TDL5 484 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 C2orf15Q8WU43 125 aaKnown RBP11.35□□□□□ -0.59
HMGN1-215ENST00000485550 ZC3H10Q96K80 434 aaKnown RBP11.35□□□□□ -0.59
HMGN1-215ENST00000485550 ZNF396Q96N95 335 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-215ENST00000485550 HHIPQ96QV1 700 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 SIX4Q9UIU6 781 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 GTF3C4Q9UKN8 822 aa11.35□□□□□ -0.59
HMGN1-215ENST00000485550 MYOFQ9NZM1 2061 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 CCDC163A0A0D9SF12 145 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 LNP1A1A4G5 178 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 CLIC2O15247 247 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 PPP6R2O75170 966 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 CAVIN2O95810 425 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 F11P03951 625 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 CASP1P29466 404 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms