RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 GPR161Q8N6U8 529 aaKnown RBP27.48■■□□□ 1.99
HLA-F-227ENST00000485513 RIN3Q8TB24 985 aa27.48■■□□□ 1.99
HLA-F-227ENST00000485513 CGNQ9P2M7 1197 aaKnown RBP27.48■■□□□ 1.99
HLA-F-227ENST00000485513 CACNA1AO00555 2505 aa27.47■■□□□ 1.99
HLA-F-227ENST00000485513 GREB1Q4ZG55 1949 aa27.47■■□□□ 1.99
HLA-F-227ENST00000485513 ANAPC1Q9H1A4 1944 aa27.47■■□□□ 1.99
HLA-F-227ENST00000485513 TRAV19A0A0A6YYK7 116 aa27.47■■□□□ 1.99
HLA-F-227ENST00000485513 BDNFP23560 247 aa27.47■■□□□ 1.99
HLA-F-227ENST00000485513 C12orf56Q8IXR9 622 aa27.47■■□□□ 1.99
HLA-F-227ENST00000485513 CEP57L1Q8IYX8 460 aa27.47■■□□□ 1.99
HLA-F-227ENST00000485513 FSIP1Q8NA03 581 aa27.47■■□□□ 1.99
HLA-F-227ENST00000485513 SNX25Q9H3E2 840 aa27.47■■□□□ 1.99
HLA-F-227ENST00000485513 GMEB2Q9UKD1 530 aa27.47■■□□□ 1.99
HLA-F-227ENST00000485513 PTPRDP23468 1912 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 OTOL1A6NHN0 477 aaPredicted RBP27.46■■□□□ 1.99
HLA-F-227ENST00000485513 CHURC1-FNTBB4DL54 471 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 K7ESF4 209 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 CKMP06732 381 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 USP17L7P0C7H9 530 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 ARSAP15289 507 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 FNTBP49356 437 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 CYP27A1Q02318 531 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 DNM1Q05193 864 aaKnown RBP27.46■■□□□ 1.99
HLA-F-227ENST00000485513 FAM160A1Q05DH4 1040 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 DMWDQ09019 674 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 PDGFRLQ15198 375 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 KNOP1Q1ED39 458 aaKnown RBP27.46■■□□□ 1.99
HLA-F-227ENST00000485513 GRAMD1CQ8IYS0 662 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 SPRYD3Q8NCJ5 442 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 SPATA17Q96L03 361 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 SLC22A12Q96S37 553 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 CYP2S1Q96SQ9 504 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 MRPL45Q9BRJ2 306 aaKnown RBP27.46■■□□□ 1.99
HLA-F-227ENST00000485513 RCOR1Q9UKL0 485 aa27.46■■□□□ 1.99
HLA-F-227ENST00000485513 TACC1O75410 805 aa27.45■■□□□ 1.98
HLA-F-227ENST00000485513 GNL1P36915 607 aaPredicted RBP27.45■■□□□ 1.98
HLA-F-227ENST00000485513 GRIK1P39086 918 aa27.45■■□□□ 1.98
HLA-F-227ENST00000485513 TNNC1P63316 161 aa27.45■■□□□ 1.98
HLA-F-227ENST00000485513 AMPD2Q01433 879 aa27.45■■□□□ 1.98
HLA-F-227ENST00000485513 GRSF1Q12849 480 aaKnown RBP eCLIP27.45■■□□□ 1.98
HLA-F-227ENST00000485513 PUM1Q14671 1186 aaKnown RBP eCLIP27.45■■□□□ 1.98
HLA-F-227ENST00000485513 MTF1Q14872 753 aa27.45■■□□□ 1.98
HLA-F-227ENST00000485513 LPAL2Q16609 132 aa27.45■■□□□ 1.98
HLA-F-227ENST00000485513 TMEM196Q5HYL7 178 aa27.45■■□□□ 1.98
HLA-F-227ENST00000485513 MYCBPAPQ8TBZ2 947 aa27.45■■□□□ 1.98
HLA-F-227ENST00000485513 PCED1BQ96HM7 432 aa27.45■■□□□ 1.98
HLA-F-227ENST00000485513 CEP295NLQ96MC4 621 aa27.45■■□□□ 1.98
HLA-F-227ENST00000485513 C2orf42Q9NWW7 574 aa27.45■■□□□ 1.98
HLA-F-227ENST00000485513 SERTAD1Q9UHV2 236 aa27.45■■□□□ 1.98
HLA-F-227ENST00000485513 EXOC3O60645 756 aa27.44■■□□□ 1.98
HLA-F-227ENST00000485513 FAM163BP0C2L3 166 aa27.44■■□□□ 1.98
HLA-F-227ENST00000485513 SLFN14P0C7P3 912 aa27.44■■□□□ 1.98
HLA-F-227ENST00000485513 ANXA13P27216 316 aa27.44■■□□□ 1.98
HLA-F-227ENST00000485513 TRPC3Q13507 836 aa27.44■■□□□ 1.98
HLA-F-227ENST00000485513 ZNF77Q15935 545 aa27.44■■□□□ 1.98
HLA-F-227ENST00000485513 WDR72Q3MJ13 1102 aa27.44■■□□□ 1.98
HLA-F-227ENST00000485513 HEATR6Q6AI08 1181 aaKnown RBP27.44■■□□□ 1.98
HLA-F-227ENST00000485513 PRR23BQ6ZRT6 265 aa27.44■■□□□ 1.98
HLA-F-227ENST00000485513 LONP2Q86WA8 852 aa27.44■■□□□ 1.98
HLA-F-227ENST00000485513 ARL14EPQ8N8R7 260 aaPredicted RBP27.44■■□□□ 1.98
HLA-F-227ENST00000485513 TTC16Q8NEE8 873 aa27.44■■□□□ 1.98
HLA-F-227ENST00000485513 OR6B3Q8NGW1 331 aa27.44■■□□□ 1.98
HLA-F-227ENST00000485513 ZNF516Q92618 1163 aa27.44■■□□□ 1.98
HLA-F-227ENST00000485513 CHFRQ96EP1 664 aa27.44■■□□□ 1.98
HLA-F-227ENST00000485513 GZF1Q9H116 711 aaPredicted RBP27.44■■□□□ 1.98
HLA-F-227ENST00000485513 C2orf78A6NCI8 922 aa27.43■■□□□ 1.98
HLA-F-227ENST00000485513 TRDMT1O14717 391 aaKnown RBP27.43■■□□□ 1.98
HLA-F-227ENST00000485513 USP4Q13107 963 aa27.43■■□□□ 1.98
HLA-F-227ENST00000485513 KCNB1Q14721 858 aa27.43■■□□□ 1.98
HLA-F-227ENST00000485513 MDH1BQ5I0G3 518 aa27.43■■□□□ 1.98
HLA-F-227ENST00000485513 LAIR1Q6GTX8 287 aa27.43■■□□□ 1.98
HLA-F-227ENST00000485513 FSTL4Q6MZW2 842 aa27.43■■□□□ 1.98
HLA-F-227ENST00000485513 DGLUCYQ7Z3D6 616 aa27.43■■□□□ 1.98
HLA-F-227ENST00000485513 GOLGA5Q8TBA6 731 aa27.43■■□□□ 1.98
HLA-F-227ENST00000485513 DUS2Q9NX74 493 aaKnown RBP27.43■■□□□ 1.98
HLA-F-227ENST00000485513 GCNT4Q9P109 453 aa27.43■■□□□ 1.98
HLA-F-227ENST00000485513 NME7Q9Y5B8 376 aa27.43■■□□□ 1.98
HLA-F-227ENST00000485513 TRIM66O15016 1216 aa27.42■■□□□ 1.98
HLA-F-227ENST00000485513 HRO43593 1189 aa27.42■■□□□ 1.98
HLA-F-227ENST00000485513 STAU1O95793 577 aaKnown RBP27.42■■□□□ 1.98
HLA-F-227ENST00000485513 HOXA6P31267 233 aa27.42■■□□□ 1.98
HLA-F-227ENST00000485513 CNR2P34972 360 aa27.42■■□□□ 1.98
HLA-F-227ENST00000485513 MYL6P60660 151 aa27.42■■□□□ 1.98
HLA-F-227ENST00000485513 SIM2Q14190 667 aaPredicted RBP27.42■■□□□ 1.98
HLA-F-227ENST00000485513 DENND5BQ6ZUT9 1274 aa27.42■■□□□ 1.98
HLA-F-227ENST00000485513 CPA6Q8N4T0 437 aa27.42■■□□□ 1.98
HLA-F-227ENST00000485513 OSCP1Q8WVF1 389 aa27.42■■□□□ 1.98
HLA-F-227ENST00000485513 DLL3Q9NYJ7 618 aa27.42■■□□□ 1.98
HLA-F-227ENST00000485513 EHD2Q9NZN4 543 aa27.42■■□□□ 1.98
HLA-F-227ENST00000485513 USP18Q9UMW8 372 aa27.42■■□□□ 1.98
HLA-F-227ENST00000485513 ATG2BQ96BY7 2078 aa27.41■■□□□ 1.98
HLA-F-227ENST00000485513 ACTN4O43707 911 aaKnown RBP27.41■■□□□ 1.98
HLA-F-227ENST00000485513 KLRC4O43908 158 aa27.41■■□□□ 1.98
HLA-F-227ENST00000485513 PHACTR2O75167 634 aa27.41■■□□□ 1.98
HLA-F-227ENST00000485513 PTPN1P18031 435 aaKnown RBP27.41■■□□□ 1.98
HLA-F-227ENST00000485513 HDCP19113 662 aa27.41■■□□□ 1.98
HLA-F-227ENST00000485513 ATICP31939 592 aa27.41■■□□□ 1.98
HLA-F-227ENST00000485513 IFNAR2P48551 515 aa27.41■■□□□ 1.98
HLA-F-227ENST00000485513 PDE6CP51160 858 aa27.41■■□□□ 1.98
HLA-F-227ENST00000485513 RSPO4Q2I0M5 234 aaPredicted RBP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms