RNA–Protein interactions for RNA: ENST00000485476.2

LDLRAP1-206, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 5

Gene LDLRAP1, Length 238 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-206ENST00000485476 R3HCC1Q9Y3T6 440 aaKnown RBP12.79□□□□□ -0.36
LDLRAP1-206ENST00000485476 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.79□□□□□ -0.36
LDLRAP1-206ENST00000485476 FAM208BQ5VWN6 2430 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 SCN1AP35498 2009 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 ITGB3P05106 788 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 KCNA4P22459 653 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 GJB2P29033 226 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 HOXC13P31276 330 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 HOXD12P35452 270 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 NOVA1P51513 510 aaKnown RBP12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 SLC7A9P82251 487 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 LMAN2Q12907 356 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 CCDC6Q16204 474 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 LMBRD2Q68DH5 695 aaPredicted RBP12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 PSAPL1Q6NUJ1 521 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 SV2BQ7L1I2 683 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 ADGRF2Q8IZF7 708 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 CSGALNACT2Q8N6G5 542 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 OLIG1Q8TAK6 271 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 KCNV2Q8TDN2 545 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 SH3RF2Q8TEC5 729 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 EZH1Q92800 747 aaPredicted RBP12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 TMX3Q96JJ7 454 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 DUSP9Q99956 384 aaKnown RBP12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 FAM213AQ9BRX8 229 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 TTLL2Q9BWV7 592 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 MRPL44Q9H9J2 332 aaKnown RBP12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 TMEM9BQ9NQ34 198 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 RBAKQ9NYW8 714 aaPredicted RBP12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 TRPM5Q9NZQ8 1165 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 MAGEC2Q9UBF1 373 aaPredicted RBP12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 GTF3C4Q9UKN8 822 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 MMP17Q9ULZ9 603 aa12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 MORC2Q9Y6X9 1032 aaPredicted RBP12.78□□□□□ -0.36
LDLRAP1-206ENST00000485476 MYMKA6NI61 221 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 C4orf47A7E2U8 309 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 UPK3BL1B0FP48 263 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 UPK3BL2E5RIL1 263 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 K7EQS6 105 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 TNFRSF10BO14763 440 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 TRIM66O15016 1216 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 TXLNAP40222 546 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 GPR15P49685 360 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 PREPLQ4J6C6 727 aaPredicted RBP12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 LARP1BQ659C4 914 aaKnown RBP12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 SFR1Q86XK3 245 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 DDX42Q86XP3 938 aaKnown RBP eCLIP12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 ARL14EPQ8N8R7 260 aaPredicted RBP12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 DNAJC19Q96DA6 116 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 ANKRD36BP1Q96IX9 119 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 CYP2S1Q96SQ9 504 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 KIAA1586Q9HCI6 787 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 TRPC7Q9HCX4 862 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 WASF3Q9UPY6 502 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 SMC3Q9UQE7 1217 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 SNX9Q9Y5X1 595 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 WNT6Q9Y6F9 365 aa12.77□□□□□ -0.37
LDLRAP1-206ENST00000485476 TSC2P49815 1807 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 LNP1A1A4G5 178 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 FRMD3A2A2Y4 597 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 TISP43B9A030 160 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 TMEM191BP0C7N4 346 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 GBP1P32455 592 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 OPRD1P41143 372 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 TNFRSF4P43489 277 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 NOP14P78316 857 aaKnown RBP12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 PSMD2Q13200 908 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 SF3A1Q15459 793 aaKnown RBP12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 CRY1Q16526 586 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 DUOXA2Q1HG44 320 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 SOWAHAQ2M3V2 549 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 RRAGBQ5VZM2 374 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 UNQ6494/PRO21346Q6UXR6 183 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 CCDC73Q6ZRK6 1079 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 DENND5BQ6ZUT9 1274 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 STXBP4Q6ZWJ1 553 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 LPCAT2Q7L5N7 544 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 CYP2U1Q7Z449 544 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 ADGRG2Q8IZP9 1017 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 OTUB2Q96DC9 234 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 C8orf48Q96LL4 319 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 SLC22A12Q96S37 553 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 LINC00597Q9H2U6 94 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 TBC1D14Q9P2M4 693 aa12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 SRPRBQ9Y5M8 271 aaKnown RBP12.76□□□□□ -0.37
LDLRAP1-206ENST00000485476 LEFTY2O00292 366 aa12.75□□□□□ -0.37
LDLRAP1-206ENST00000485476 CDX4O14627 284 aaPredicted RBP12.75□□□□□ -0.37
LDLRAP1-206ENST00000485476 DCLK1O15075 740 aa12.75□□□□□ -0.37
LDLRAP1-206ENST00000485476 OLFM2O95897 454 aa12.75□□□□□ -0.37
LDLRAP1-206ENST00000485476 TNNC2P02585 160 aa12.75□□□□□ -0.37
LDLRAP1-206ENST00000485476 WARSP23381 471 aaKnown RBP12.75□□□□□ -0.37
LDLRAP1-206ENST00000485476 ACAT1P24752 427 aaKnown RBP12.75□□□□□ -0.37
LDLRAP1-206ENST00000485476 ANXA13P27216 316 aa12.75□□□□□ -0.37
LDLRAP1-206ENST00000485476 P2RY2P41231 377 aa12.75□□□□□ -0.37
LDLRAP1-206ENST00000485476 ZNF252P-AS1Q0IIN9 211 aa12.75□□□□□ -0.37
LDLRAP1-206ENST00000485476 EOGTQ5NDL2 527 aa12.75□□□□□ -0.37
LDLRAP1-206ENST00000485476 SH3PXD2AQ5TCZ1 1133 aa12.75□□□□□ -0.37
LDLRAP1-206ENST00000485476 SDHAF4Q5VUM1 108 aa12.75□□□□□ -0.37
LDLRAP1-206ENST00000485476 DENND4CQ5VZ89 1909 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms