RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 ATP2A3Q93084 1043 aa6.89□□□□□ -1.31
CAPN13-206ENST00000485248 UROC1Q96N76 676 aa6.89□□□□□ -1.31
CAPN13-206ENST00000485248 MIR1-1HGQ9H1L0 117 aa6.89□□□□□ -1.31
CAPN13-206ENST00000485248 TASP1Q9H6P5 420 aa6.89□□□□□ -1.31
CAPN13-206ENST00000485248 TOR4AQ9NXH8 423 aa6.89□□□□□ -1.31
CAPN13-206ENST00000485248 CEP72Q9P209 647 aa6.89□□□□□ -1.31
CAPN13-206ENST00000485248 AFF4Q9UHB7 1163 aaKnown RBP6.89□□□□□ -1.31
CAPN13-206ENST00000485248 MAN2B2Q9Y2E5 1009 aa6.89□□□□□ -1.31
CAPN13-206ENST00000485248 YIPF1Q9Y548 306 aa6.89□□□□□ -1.31
CAPN13-206ENST00000485248 NUB1Q9Y5A7 615 aa6.89□□□□□ -1.31
CAPN13-206ENST00000485248 PCDHGB2Q9Y5G2 931 aa6.89□□□□□ -1.31
CAPN13-206ENST00000485248 MORC2Q9Y6X9 1032 aaPredicted RBP6.89□□□□□ -1.31
CAPN13-206ENST00000485248 CFAP46Q8IYW2 2715 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 MYO16Q9Y6X6 1858 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 SMTNL1A8MU46 457 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 ASAP2O43150 1006 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 NEMFO60524 1076 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 TSPAN1O60635 241 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 GAS7O60861 476 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 GADD45BO75293 160 aaPredicted RBP6.88□□□□□ -1.31
CAPN13-206ENST00000485248 CILPO75339 1184 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 DXOO77932 396 aaKnown RBP6.88□□□□□ -1.31
CAPN13-206ENST00000485248 SEC24AO95486 1093 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 F13A1P00488 732 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 CDC25BP30305 580 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 USP11P51784 963 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 ADCY7P51828 1080 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 INHBCP55103 352 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 TLE1Q04724 770 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 VEPH1Q14D04 833 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 SGO2Q562F6 1265 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 TRMT11Q7Z4G4 463 aaKnown RBP6.88□□□□□ -1.31
CAPN13-206ENST00000485248 RALYLQ86SE5 291 aaKnown RBP6.88□□□□□ -1.31
CAPN13-206ENST00000485248 TEX2Q8IWB9 1127 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 DHX40Q8IX18 779 aaKnown RBP6.88□□□□□ -1.31
CAPN13-206ENST00000485248 FRMD1Q8N878 549 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 RNF214Q8ND24 703 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 BAHD1Q8TBE0 780 aaPredicted RBP6.88□□□□□ -1.31
CAPN13-206ENST00000485248 USP33Q8TEY7 942 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 FAM227BQ96M60 508 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 POLR3CQ9BUI4 534 aaPredicted RBP6.88□□□□□ -1.31
CAPN13-206ENST00000485248 GLT8D2Q9H1C3 349 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 HPS4Q9NQG7 708 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 LIMCH1Q9UPQ0 1083 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 ASB3Q9Y575 518 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 CREBBPQ92793 2442 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 PLXND1Q9Y4D7 1925 aa6.88□□□□□ -1.31
CAPN13-206ENST00000485248 C2CD3Q4AC94 2353 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 PTPRQQ9UMZ3 2332 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 A0A0D9SFI3 127 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 TMEM189-UBE2V1I3L0A0 370 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 SYN3O14994 580 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 DHX15O43143 795 aaKnown RBP6.87□□□□□ -1.31
CAPN13-206ENST00000485248 SGSM2O43147 1006 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 STX6O43752 255 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 DKC1O60832 514 aaKnown RBP eCLIP6.87□□□□□ -1.31
CAPN13-206ENST00000485248 RFPL3O75679 317 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 PRAMEF12O95522 483 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 KLF8O95600 359 aaPredicted RBP6.87□□□□□ -1.31
CAPN13-206ENST00000485248 TUBB4AP04350 444 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 ARSAP15289 507 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 MARCKSP29966 332 aaPredicted RBP6.87□□□□□ -1.31
CAPN13-206ENST00000485248 SLC20A2Q08357 652 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 LAMTOR4Q0VGL1 99 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 TARDBPQ13148 414 aaKnown RBP eCLIP6.87□□□□□ -1.31
CAPN13-206ENST00000485248 MSS51Q4VC12 460 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 DNTTIP2Q5QJE6 756 aaKnown RBP6.87□□□□□ -1.31
CAPN13-206ENST00000485248 HES3Q5TGS1 186 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 KIAA1614Q5VZ46 1190 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 WWC2Q6AWC2 1192 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 PPP4R3AQ6IN85 833 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 XKR5Q6UX68 686 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 MIER3Q7Z3K6 550 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 LSMEM2Q8N112 164 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 ZCCHC9Q8N567 271 aaKnown RBP6.87□□□□□ -1.31
CAPN13-206ENST00000485248 TXNDC5Q8NBS9 432 aaKnown RBP6.87□□□□□ -1.31
CAPN13-206ENST00000485248 TSEN2Q8NCE0 465 aaKnown RBP6.87□□□□□ -1.31
CAPN13-206ENST00000485248 APPL2Q8NEU8 664 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 MOCOSQ96EN8 888 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 TMEM87BQ96K49 555 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 ZNF578Q96N58 590 aaPredicted RBP6.87□□□□□ -1.31
CAPN13-206ENST00000485248 MTMR9Q96QG7 549 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 FAM83CQ9BQN1 747 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 SH2D3AQ9BRG2 576 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 ADPGKQ9BRR6 497 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 TEKT3Q9BXF9 490 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 RBCK1Q9BYM8 510 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 DPH1Q9BZG8 443 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 SMG9Q9H0W8 520 aaKnown RBP6.87□□□□□ -1.31
CAPN13-206ENST00000485248 TTC12Q9H892 705 aaPredicted RBP6.87□□□□□ -1.31
CAPN13-206ENST00000485248 ECT2Q9H8V3 914 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 FBRSL1Q9HCM7 1045 aaKnown RBP6.87□□□□□ -1.31
CAPN13-206ENST00000485248 DUS2Q9NX74 493 aaKnown RBP6.87□□□□□ -1.31
CAPN13-206ENST00000485248 CGNQ9P2M7 1197 aaKnown RBP6.87□□□□□ -1.31
CAPN13-206ENST00000485248 PCDHGA1Q9Y5H4 931 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 ABCA12Q86UK0 2595 aa6.87□□□□□ -1.31
CAPN13-206ENST00000485248 GOLGA4Q13439 2230 aaKnown RBP6.86□□□□□ -1.31
CAPN13-206ENST00000485248 IGKV6-21A0A0C4DH24 114 aa6.86□□□□□ -1.31
CAPN13-206ENST00000485248 ANO9A1A5B4 782 aa6.86□□□□□ -1.31
CAPN13-206ENST00000485248 MYMKA6NI61 221 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms