RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 GPR15P49685 360 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 CDR1P51861 262 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 TAF12Q16514 161 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 POTEHQ6S545 545 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 FAM35AQ86V20 835 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 SCN4BQ8IWT1 228 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 UBALD2Q8IYN6 164 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 SMARCD1Q96GM5 515 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 TTLL2Q9BWV7 592 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 TRPV4Q9HBA0 871 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 CSNK1G1Q9HCP0 422 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 SAMSN1Q9NSI8 373 aaKnown RBP18.89■□□□□ 0.61
SREBF1-213ENST00000485080 GREB1Q4ZG55 1949 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 TECTAO75443 2155 aa18.89■□□□□ 0.61
SREBF1-213ENST00000485080 F8VP50 259 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 F11P03951 625 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 ANXA13P27216 316 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 GABRR2P28476 465 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 RAD23BP54727 409 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 TDGQ13569 410 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 SKOR2Q2VWA4 1001 aaPredicted RBP18.88■□□□□ 0.61
SREBF1-213ENST00000485080 TCP11X2Q5H9J9 407 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 C11orf57Q6ZUT1 292 aaPredicted RBP18.88■□□□□ 0.61
SREBF1-213ENST00000485080 TMEM150AQ86TG1 271 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 C12orf29Q8N999 325 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 SLC4A11Q8NBS3 891 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 EDAQ92838 391 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 TMEM176AQ96HP8 235 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 FAM81BQ96LP2 452 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 BPIFA3Q9BQP9 254 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 TUBGCP2Q9BSJ2 902 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 INTS2Q9H0H0 1204 aaKnown RBP18.88■□□□□ 0.61
SREBF1-213ENST00000485080 TMEM30AQ9NV96 361 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 IL37Q9NZH6 218 aa18.88■□□□□ 0.61
SREBF1-213ENST00000485080 A0A1W2PRU2 124 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 KCNJ18B7U540 433 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 CLDN5O00501 218 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 ECI2O75521 394 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 ASGR2P07307 311 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 ACO1P21399 889 aaKnown RBP18.87■□□□□ 0.61
SREBF1-213ENST00000485080 DDX6P26196 483 aaKnown RBP eCLIP18.87■□□□□ 0.612e-6■■■■■ 29.5
SREBF1-213ENST00000485080 CACNA2D1P54289 1103 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 ZXDAP98168 799 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 MYL5Q02045 173 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 MTMR3Q13615 1198 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 KCNJ12Q14500 433 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 TEAD2Q15562 447 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 VWA3BQ502W6 1294 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 MIIPQ5JXC2 388 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 SDHAF4Q5VUM1 108 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 GBP6Q6ZN66 633 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 DENND5BQ6ZUT9 1274 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 ENOSF1Q7L5Y1 443 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 SLC2A14Q8TDB8 520 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 GPR152Q8TDT2 470 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 ING5Q8WYH8 240 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 MCRS1Q96EZ8 462 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 CYFIP2Q96F07 1278 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 ASB16Q96NS5 453 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 FUCA2Q9BTY2 467 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 NAT10Q9H0A0 1025 aaKnown RBP18.87■□□□□ 0.61
SREBF1-213ENST00000485080 NDST4Q9H3R1 872 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 DMAP1Q9NPF5 467 aaPredicted RBP18.87■□□□□ 0.61
SREBF1-213ENST00000485080 COMMD8Q9NX08 183 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 GCNT4Q9P109 453 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 KIAA1257Q9ULG3 409 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 CNTN6Q9UQ52 1028 aa18.87■□□□□ 0.61
SREBF1-213ENST00000485080 DENND4CQ5VZ89 1909 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 CCDC130P13994 396 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 LRMPQ12912 555 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 ORC1Q13415 861 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 NCAPHQ15003 741 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 EXOC3L4Q17RC7 722 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 ARHGAP15Q53QZ3 475 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 ARHGAP17Q68EM7 881 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 PHLDB3Q6NSJ2 640 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 TRIM65Q6PJ69 517 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 PARM1Q6UWI2 310 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 CREBRFQ8IUR6 639 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 PPM1KQ8N3J5 372 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 SLC44A3Q8N4M1 653 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 FGF14Q92915 247 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 SMARCD2Q92925 531 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 E2F7Q96AV8 911 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 ELSPBP1Q96BH3 223 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 GCNAQ96QF7 691 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 ATXN3LQ9H3M9 355 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 TASP1Q9H6P5 420 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 PNPLA8Q9NP80 782 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 ZDBF2Q9HCK1 2354 aa18.86■□□□□ 0.61
SREBF1-213ENST00000485080 NCANO14594 1321 aa18.85■□□□□ 0.61
SREBF1-213ENST00000485080 FAM92AA1XBS5 289 aa18.85■□□□□ 0.61
SREBF1-213ENST00000485080 TNFRSF10BO14763 440 aa18.85■□□□□ 0.61
SREBF1-213ENST00000485080 AP1G2O75843 785 aa18.85■□□□□ 0.61
SREBF1-213ENST00000485080 RTN3O95197 1032 aaPredicted RBP18.85■□□□□ 0.61
SREBF1-213ENST00000485080 PAEPP09466 180 aa18.85■□□□□ 0.61
SREBF1-213ENST00000485080 FAM200BP0CF97 657 aa18.85■□□□□ 0.61
SREBF1-213ENST00000485080 ZNF18P17022 549 aa18.85■□□□□ 0.61
SREBF1-213ENST00000485080 FCARP24071 287 aa18.85■□□□□ 0.61
SREBF1-213ENST00000485080 PPP3CCP48454 512 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms