RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 VAT1LQ9HCJ6 419 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 ARGLU1Q9NWB6 273 aaPredicted RBP5.68□□□□□ -1.5
CCDC39-205ENST00000485055 ZNF624Q9P2J8 865 aaPredicted RBP5.68□□□□□ -1.5
CCDC39-205ENST00000485055 MYH15Q9Y2K3 1946 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 KMT2EQ8IZD2 1858 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 MTCL1Q9Y4B5 1905 aaKnown RBP5.68□□□□□ -1.5
CCDC39-205ENST00000485055 CCDC66A2RUB6 948 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 INO80B-WBP1J3KQ70 363 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 EREGO14944 169 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 CCNE2O96020 404 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 PSAPP07602 524 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 SFTPCP11686 197 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 SKIV2L2P42285 1042 aaKnown RBP5.68□□□□□ -1.5
CCDC39-205ENST00000485055 FAPQ12884 760 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 SGCGQ13326 291 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 KLF1Q13351 362 aaPredicted RBP5.68□□□□□ -1.5
CCDC39-205ENST00000485055 KCNC3Q14003 757 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 FAM209BQ5JX69 171 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 SLC22A25Q6T423 547 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 Q7L0L9 218 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 ZNF410Q86VK4 478 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 LIX1LQ8IVB5 337 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 REXO1Q8N1G1 1221 aaKnown RBP5.68□□□□□ -1.5
CCDC39-205ENST00000485055 BTN2A2Q8WVV5 523 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 MYLIPQ8WY64 445 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 WASF1Q92558 559 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 ZNF669Q96BR6 464 aaPredicted RBP5.68□□□□□ -1.5
CCDC39-205ENST00000485055 AHCYL2Q96HN2 611 aaKnown RBP5.68□□□□□ -1.5
CCDC39-205ENST00000485055 CELF4Q9BZC1 486 aaKnown RBP5.68□□□□□ -1.5
CCDC39-205ENST00000485055 SLC28A3Q9HAS3 691 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 ETNK1Q9HBU6 452 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 ZNF304Q9HCX3 659 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 DMRT3Q9NQL9 472 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 THEGQ9P2T0 379 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 MAGED2Q9UNF1 606 aaPredicted RBP5.68□□□□□ -1.5
CCDC39-205ENST00000485055 CYP46A1Q9Y6A2 500 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 ARPC4-TTLL3A0A0A6YYG9 625 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 A0A1W2PQU0 124 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 FAM86B1E9PN63 330 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 ZNF623O75123 536 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 FAM86B2P0C5J1 330 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 ACRP10323 421 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 MYCLP12524 364 aaPredicted RBP5.67□□□□□ -1.5
CCDC39-205ENST00000485055 P4HA1P13674 534 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 PBX2P40425 430 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 STAT5BP51692 787 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 NAPAP54920 295 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 ARID5BQ14865 1188 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 NAA25Q14CX7 972 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 CREG2Q8IUH2 290 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 ATG16L2Q8NAA4 619 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 TTC16Q8NEE8 873 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 WDR24Q96S15 920 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 PPP1R9BQ96SB3 815 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 JPH2Q9BR39 696 aaPredicted RBP5.67□□□□□ -1.5
CCDC39-205ENST00000485055 TCHPQ9BT92 498 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 MENTQ9BUN1 341 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 DDX23Q9BUQ8 820 aaKnown RBP5.67□□□□□ -1.5
CCDC39-205ENST00000485055 COQ3Q9NZJ6 369 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 C19orf53Q9UNZ5 99 aaPredicted RBP5.67□□□□□ -1.5
CCDC39-205ENST00000485055 APOBEC2Q9Y235 224 aaKnown RBP5.67□□□□□ -1.5
CCDC39-205ENST00000485055 PCDHA10Q9Y5I2 948 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 BAZ2BQ9UIF8 2168 aaKnown RBP5.67□□□□□ -1.5
CCDC39-205ENST00000485055 EVPLQ92817 2033 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 NOP56O00567 594 aaKnown RBP5.67□□□□□ -1.5
CCDC39-205ENST00000485055 PAHP00439 452 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 ZNF286BP0CG31 522 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 STAG3L1P0CL83 205 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 ARP10275 920 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 CCL23P55773 120 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 IL2P60568 153 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 GBE1Q04446 702 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 ZNF423Q2M1K9 1284 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 MRPL10Q7Z7H8 261 aaKnown RBP5.67□□□□□ -1.5
CCDC39-205ENST00000485055 GALNT7Q86SF2 657 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 NOSTRINQ8IVI9 506 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 KIAA0319LQ8IZA0 1049 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 AVL9Q8NBF6 648 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 SLC17A8Q8NDX2 589 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 RABGGTAQ92696 567 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 CCDC51Q96ER9 411 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 ACAT2Q9BWD1 397 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 COL25A1Q9BXS0 654 aaPredicted RBP5.67□□□□□ -1.5
CCDC39-205ENST00000485055 ABCB6Q9NP58 842 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 FAM86C1Q9NVL1 165 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 HPF1Q9NWY4 346 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 TMEM98Q9Y2Y6 226 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 ADGRA3Q8IWK6 1321 aa5.67□□□□□ -1.5
CCDC39-205ENST00000485055 WDR64B1ANS9 1081 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 ASAP2O43150 1006 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 URI1O94763 535 aaPredicted RBP5.66□□□□□ -1.5
CCDC39-205ENST00000485055 INSRRP14616 1297 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 PTGS1P23219 599 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 ATP5F1P24539 256 aaPredicted RBP5.66□□□□□ -1.5
CCDC39-205ENST00000485055 BMPR1AP36894 532 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 KIF11P52732 1056 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 C21orf58P58505 322 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 COASYQ13057 564 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 CLUL1Q15846 466 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 PIK3R6Q5UE93 754 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms