RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 MED10Q9BTT4 135 aa16.58■□□□□ 0.24
RPP40-206ENST00000483546 ZNF518BQ9C0D4 1074 aa16.58■□□□□ 0.24
RPP40-206ENST00000483546 INTS2Q9H0H0 1204 aaKnown RBP16.58■□□□□ 0.24
RPP40-206ENST00000483546 DMAP1Q9NPF5 467 aaPredicted RBP16.58■□□□□ 0.24
RPP40-206ENST00000483546 HMGXB4Q9UGU5 601 aa16.58■□□□□ 0.24
RPP40-206ENST00000483546 KIAA1257Q9ULG3 409 aa16.58■□□□□ 0.24
RPP40-206ENST00000483546 PATJQ8NI35 1801 aa16.58■□□□□ 0.24
RPP40-206ENST00000483546 OBSL1O75147 1896 aa16.58■□□□□ 0.24
RPP40-206ENST00000483546 BDP1A6H8Y1 2624 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 SLC38A8A6NNN8 435 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 SMTNL1A8MU46 457 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 HMGA1P17096 107 aaKnown RBP16.57■□□□□ 0.24
RPP40-206ENST00000483546 LRMPQ12912 555 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 DDR2Q16832 855 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 ANO6Q4KMQ2 910 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 ARHGAP15Q53QZ3 475 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 TRIM65Q6PJ69 517 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 DENND5BQ6ZUT9 1274 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 UBR7Q8N806 425 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 GIPC2Q8TF65 315 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 CYFIP2Q96F07 1278 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 TWNKQ96RR1 684 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 FUCA2Q9BTY2 467 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 FANCLQ9NW38 375 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 COMMD8Q9NX08 183 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 VCANP13611 3396 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 CUL9Q8IWT3 2517 aa16.57■□□□□ 0.24
RPP40-206ENST00000483546 NUP210Q8TEM1 1887 aaPredicted RBP16.56■□□□□ 0.24
RPP40-206ENST00000483546 ANHXE9PGG2 379 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 F8VP50 259 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 DCXO43602 365 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 PAEPP09466 180 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 CEBPBP17676 345 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 DDX6P26196 483 aaKnown RBP eCLIP16.56■□□□□ 0.24
RPP40-206ENST00000483546 GABRR2P28476 465 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 CCR2P41597 374 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 PPP3CCP48454 512 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 GPR15P49685 360 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 RAD23BP54727 409 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 PTPN21Q16825 1174 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 MIIPQ5JXC2 388 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 ARHGAP17Q68EM7 881 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 PAQR9Q6ZVX9 377 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 SLC4A11Q8NBS3 891 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 SHKBP1Q8TBC3 707 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 SLC2A14Q8TDB8 520 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 TTLL2Q9BWV7 592 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 IL21Q9HBE4 155 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 CSNK1G1Q9HCP0 422 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 ZNF334Q9HCZ1 680 aaPredicted RBP16.56■□□□□ 0.24
RPP40-206ENST00000483546 PNPLA8Q9NP80 782 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 KRT82Q9NSB4 513 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 APEX2Q9UBZ4 518 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 LIMD1Q9UGP4 676 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 SORCS3Q9UPU3 1222 aa16.56■□□□□ 0.24
RPP40-206ENST00000483546 A0A1W2PRU2 124 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 SYCE3A1L190 88 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 CLDN5O00501 218 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 MOSPD3O75425 235 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 AP1G2O75843 785 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 RTN3O95197 1032 aaPredicted RBP16.55■□□□□ 0.24
RPP40-206ENST00000483546 FAM200BP0CF97 657 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 CCDC130P13994 396 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 WEE1P30291 646 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 ZNF165P49910 485 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 MFAP3P55082 362 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 MTMR3Q13615 1198 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 HTR4Q13639 388 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 NCAPHQ15003 741 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 HSP90AA4PQ58FG1 418 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 GAREM2Q75VX8 874 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 UBALD2Q8IYN6 164 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 C12orf29Q8N999 325 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 E2F7Q96AV8 911 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 TCEAL4Q96EI5 215 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 HEXIM2Q96MH2 286 aaKnown RBP16.55■□□□□ 0.24
RPP40-206ENST00000483546 ATXN3LQ9H3M9 355 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 KCNK12Q9HB15 430 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 FAM49BQ9NUQ9 324 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 ANAPC1Q9H1A4 1944 aa16.55■□□□□ 0.24
RPP40-206ENST00000483546 PI4K2BG5E9Z4 385 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 F11P03951 625 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 VDRP11473 427 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 ZNF18P17022 549 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 PFKLP17858 780 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 ACO1P21399 889 aaKnown RBP16.54■□□□□ 0.24
RPP40-206ENST00000483546 RFX1P22670 979 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 PON1P27169 355 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 CDR1P51861 262 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 SLC8A3P57103 927 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 ORC1Q13415 861 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 TDGQ13569 410 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 KRT31Q15323 416 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 STILQ15468 1287 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 TEAD2Q15562 447 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 ZNF394Q53GI3 561 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 SGO2Q562F6 1265 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 PHLDB3Q6NSJ2 640 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 TMEM270Q6UE05 265 aa16.54■□□□□ 0.24
RPP40-206ENST00000483546 ARHGEF19Q8IW93 802 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms